Literature DB >> 33396901

Re-Evaluating the Internal Phylogenetic Relationships of Collembola by Means of Mitogenome Data.

Claudio Cucini1, Pietro P Fanciulli1, Francesco Frati1, Peter Convey2, Francesco Nardi1, Antonio Carapelli1.   

Abstract

Collembola are an ancient and early diverging lineage of basal hexapods that occur in virtually all terrestrial habitats on Earth. Phylogenetic relationships between the different orders of Collembola are fiercely debated. Despite a range of studies and the application of both morphological and genetic approaches (singly or in combination) to assess the evolutionary relationships of major lineages in the group, no consensus has been reached. Several mitogenome sequences have been published for key taxa of the class (and their number is increasing rapidly). Here, we describe two new Antarctic Collembola mitogenomes and compare all complete or semi-complete springtail mitogenome sequences available on GenBank in terms of both gene order and DNA sequence analyses in a genome evolution and molecular phylogenetic framework. With minor exceptions, we confirm the monophyly of Poduromorpha and Symphypleona sensu stricto (the latter placed at the most basal position in the springtail phylogenetic tree), whereas monophyly of Neelipleona and Entomobryomorpha is only supported when a handful of critical taxa in these two lineages are excluded. Finally, we review gene order models observed in the class, as well as the overall mitochondrial nucleotide composition.

Entities:  

Keywords:  evolution; mitochondrial DNA; phylogeny; springtail

Mesh:

Substances:

Year:  2020        PMID: 33396901      PMCID: PMC7824276          DOI: 10.3390/genes12010044

Source DB:  PubMed          Journal:  Genes (Basel)        ISSN: 2073-4425            Impact factor:   4.096


  33 in total

1.  The phylogenetic positions of three Basal-hexapod groups (protura, diplura, and collembola) based on ribosomal RNA gene sequences.

Authors:  Yun-Xia Luan; Jon M Mallatt; Rong-Dong Xie; Yi-Ming Yang; Wen-Ying Yin
Journal:  Mol Biol Evol       Date:  2005-04-20       Impact factor: 16.240

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Review 4.  Genetic aspects of mitochondrial genome evolution.

Authors:  Matthias Bernt; Anke Braband; Bernd Schierwater; Peter F Stadler
Journal:  Mol Phylogenet Evol       Date:  2012-11-07       Impact factor: 4.286

5.  MtDNA metagenomics reveals large-scale invasion of belowground arthropod communities by introduced species.

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Journal:  Mol Ecol       Date:  2017-03-06       Impact factor: 6.185

6.  Evolution of the mitochondrial cytochrome oxidase II gene in collembola.

Authors:  F Frati; C Simon; J Sullivan; D L Swofford
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9.  Phylogenetic analysis of mitochondrial protein coding genes confirms the reciprocal paraphyly of Hexapoda and Crustacea.

Authors:  Antonio Carapelli; Pietro Liò; Francesco Nardi; Elizabeth van der Wath; Francesco Frati
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10.  Gene annotation errors are common in the mammalian mitochondrial genomes database.

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  3 in total

1.  Phylogenomics of Elongate-Bodied Springtails Reveals Independent Transitions from Aboveground to Belowground Habitats in Deep Time.

Authors:  Daoyuan Yu; Yinhuan Ding; Erik Tihelka; Chenyang Cai; Feng Hu; Manqiang Liu; Feng Zhang
Journal:  Syst Biol       Date:  2022-08-10       Impact factor: 9.160

2.  Mitogenome selection in the evolution of key ecological strategies in the ancient hexapod class Collembola.

Authors:  Daniela M Monsanto; Devon C Main; Charlene Janion-Scheepers; Arsalan Emami-Khoyi; Louis Deharveng; Anne Bedos; Mikhail Potapov; Shilpa P Parbhu; Johannes J Le Roux; Peter R Teske; Bettine Jansen van Vuuren
Journal:  Sci Rep       Date:  2022-08-31       Impact factor: 4.996

3.  A Highly Troglomorphic New Genus of Sminthuridae (Collembola, Symphypleona) from the Brazilian Semiarid Region.

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Journal:  Insects       Date:  2022-07-19       Impact factor: 3.139

  3 in total

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