Literature DB >> 33392935

Zongyanglinia huanghaiensis gen. nov., sp. nov., a novel denitrifying bacterium isolated from the yellow sea, and transfer of Pelagicola marinus to Zongyanglinia gen. nov. as Zongyanglinia marinus comb. nov.

Lili Xu1, Ang Liu2, Yan-Jiao Zhang3.   

Abstract

Two Gram-stain-negative, oxidase- and catalase-positive, aerobic strains (CY05T and H18S-6) were isolated from sediment samples of the Yellow Sea, China. The strains were positive for denitrification. Optimum growth was observed at 20 °C, pH 7.5-8.0 and with 2.0%-3.0% NaCl. The predominant cellular fatty acids (> 10%) were summed feature 8 (C18:1 ω7c and/or C18:1 ω6c), major respiratory quinone was ubiquinone-10 and main polar lipids were phosphatidylcholine, phosphatidylglycerol, phosphatidylethanolamine, one unidentified phospholipid and one unidentified aminolipid. The approximate genome size of strains CY05T and H18S-6 were 4.86 and 5.04 Mbp, the genomic G + C content of them were 54.2 and 54.5%, respectively. Both of the phylogenetic analysis based on 16S rRNA gene sequences and the up-to-date bacterial core gene (UBCG) sequences revealed that strains CY05T, H18S-6 and Pelagicola marinus DSW4-44T formed a distinct monophyletic clade within the family Rhodobacteraceae. The ANI and isDDH values between strains CY05T and H18S-6 were 94.0% and 56.5%, between CY05T and Pelagicola marinus DSW4-44T were 94.1% and 59.8%, respectively, all below the accepted threshold value for species delineation. But the ANI and isDDH values between strains H18S-6 and Pelagicola marinus DSW4-44T were 96.8% and 76.7% respectively, indicating that strains H18S-6 and Pelagicola marinus DSW4-44T belong to the same species. Based on the distinctive polyphasic evidence, CY05T represent a novel species of a novel genus of the family Rhodobacteraceae, for which the name Zongyanglinia huanghaiensis gen. nov., sp. nov. is proposed. The type strain is CY05T (= MCCC 1K04409T = KCTC 62200T). Moreover, the reclassification of Pelagicola marinus Choi et al. 2019 as Zongyanglinia marinus comb. nov. (type strain DSW4-44T = KCTC 62762T = KCCM 43261T = JCM 33637T) is proposed based on the polyphasic taxonomic data obtained in this study.

Entities:  

Keywords:  Denitrification; Polyphasic taxonomy; Rhodobacteraceae; Zongyanglinia gen. nov.

Year:  2021        PMID: 33392935     DOI: 10.1007/s10482-020-01507-1

Source DB:  PubMed          Journal:  Antonie Van Leeuwenhoek        ISSN: 0003-6072            Impact factor:   2.271


  36 in total

1.  New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0.

Authors:  Stéphane Guindon; Jean-François Dufayard; Vincent Lefort; Maria Anisimova; Wim Hordijk; Olivier Gascuel
Journal:  Syst Biol       Date:  2010-03-29       Impact factor: 15.683

2.  Phylogenomic re-assessment of the thermophilic genus Geobacillus.

Authors:  Habibu Aliyu; Pedro Lebre; Jochen Blom; Don Cowan; Pieter De Maayer
Journal:  Syst Appl Microbiol       Date:  2016-10-04       Impact factor: 4.022

3.  Aestuariicoccus marinus gen. nov., sp. nov., isolated from sea-tidal flat sediment.

Authors:  Tingye Feng; Sang Eun Jeong; Kyung Hyun Kim; Hye Yoon Park; Che Ok Jeon
Journal:  Int J Syst Evol Microbiol       Date:  2017-11-15       Impact factor: 2.747

4.  Primary adenocarcinoma of choroid plexus.

Authors:  S Shuangshoti; P Tangchai; M G Netsky
Journal:  Arch Pathol       Date:  1971-02

5.  Proposed minimal standards for the use of genome data for the taxonomy of prokaryotes.

Authors:  Jongsik Chun; Aharon Oren; Antonio Ventosa; Henrik Christensen; David Ruiz Arahal; Milton S da Costa; Alejandro P Rooney; Hana Yi; Xue-Wei Xu; Sofie De Meyer; Martha E Trujillo
Journal:  Int J Syst Evol Microbiol       Date:  2018-01       Impact factor: 2.747

6.  Phaeobacter porticola sp. nov., an antibiotic-producing bacterium isolated from a sea harbour.

Authors:  Sven Breider; Heike M Freese; Cathrin Spröer; Meinhard Simon; Jörg Overmann; Thorsten Brinkhoff
Journal:  Int J Syst Evol Microbiol       Date:  2017-07-12       Impact factor: 2.747

7.  Pelagicola marinus sp. nov. isolated from deep-sea water.

Authors:  Yoon-Soo Choi; Ji-Sung Oh; Dong-Hyun Roh
Journal:  Int J Syst Evol Microbiol       Date:  2019-12       Impact factor: 2.747

8.  Pelagimonas varians gen. nov., sp. nov., isolated from the southern North Sea.

Authors:  Sarah Hahnke; Brian J Tindall; Peter Schumann; Meinhard Simon; Thorsten Brinkhoff
Journal:  Int J Syst Evol Microbiol       Date:  2012-05-18       Impact factor: 2.747

9.  Aquicoccus porphyridii gen. nov., sp. nov., isolated from a small marine red alga, Porphyridium marinum.

Authors:  Tingye Feng; Kyung Hyun Kim; Sang Eun Jeong; Wonyong Kim; Che Ok Jeon
Journal:  Int J Syst Evol Microbiol       Date:  2017-11-21       Impact factor: 2.747

10.  Sulfitobacter pseudonitzschiae sp. nov., isolated from the toxic marine diatom Pseudo-nitzschia multiseries.

Authors:  Zhuan Hong; Qiliang Lai; Qiaoqi Luo; Simeng Jiang; Ruilin Zhu; Junrong Liang; Yahui Gao
Journal:  Int J Syst Evol Microbiol       Date:  2014-10-02       Impact factor: 2.689

View more
  1 in total

1.  Sedimentimonas flavescens gen. nov., sp. nov., isolated from sediment of Clam Island, Liaoning Province.

Authors:  Lulu Mu; Xueping Zhang; Yanfeng Zhang; Zemin Fang; Yazhong Xiao
Journal:  Antonie Van Leeuwenhoek       Date:  2022-06-07       Impact factor: 2.158

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.