Literature DB >> 33392816

Isolation and characterization of the novel Pseudomonas stutzeri bacteriophage 8P.

Xinwu Liu1, Zhou Feng1, Xiangyu Fan2, Yong Nie3, Xiao-Lei Wu4,5.   

Abstract

Bacteriophage 8P was isolated with a Pseudomonas stutzeri strain isolated from an oil reservoir as its host bacterium. The phage genome comprises 63,753 base pairs with a G+C content of 64.35. The phage encodes 63 predicted proteins, and 27 of them were functionally assigned. No tRNA genes were found. Comparative genomics analysis showed that 8P displayed some relatedness to F116-like phages (78% identity, 20% query coverage). The genome has very low sequence similarity to the other phage genomes in the GenBank database and Viral Sequence Database. Based on whole-genome analysis and transmission electron microscopy imaging, 8P is proposed to be a member of a new species in the genus Hollowayvirus, family Podoviridae.

Entities:  

Year:  2021        PMID: 33392816     DOI: 10.1007/s00705-020-04912-z

Source DB:  PubMed          Journal:  Arch Virol        ISSN: 0304-8608            Impact factor:   2.574


  27 in total

1.  The genome of the Pseudomonas aeruginosa generalized transducing bacteriophage F116.

Authors:  Michaela Byrne; Andrew M Kropinski
Journal:  Gene       Date:  2005-01-28       Impact factor: 3.688

2.  Isolation and characterization of the novel Virgibacillus-infecting bacteriophage Mimir87.

Authors:  Nikita Zrelovs; Elina Cernooka; Andris Dislers; Andris Kazaks
Journal:  Arch Virol       Date:  2019-12-24       Impact factor: 2.574

3.  Complete genome sequence of the naphthalene-degrading bacterium Pseudomonas stutzeri AN10 (CCUG 29243).

Authors:  Isabel Brunet-Galmés; Antonio Busquets; Arantxa Peña; Margarita Gomila; Balbina Nogales; Elena García-Valdés; Jorge Lalucat; Antonio Bennasar; Rafael Bosch
Journal:  J Bacteriol       Date:  2012-12       Impact factor: 3.490

4.  Removal of ZnO nanoparticles in simulated wastewater treatment processes and its effects on COD and NH(4)(+)-N reduction.

Authors:  Linlin Hou; Jing Xia; Kaiyang Li; Jian Chen; Xiaolei Wu; Xiqing Li
Journal:  Water Sci Technol       Date:  2013       Impact factor: 1.915

5.  Uncovering Earth's virome.

Authors:  David Paez-Espino; Emiley A Eloe-Fadrosh; Georgios A Pavlopoulos; Alex D Thomas; Marcel Huntemann; Natalia Mikhailova; Edward Rubin; Natalia N Ivanova; Nikos C Kyrpides
Journal:  Nature       Date:  2016-08-17       Impact factor: 49.962

6.  Nitrogen fixation island and rhizosphere competence traits in the genome of root-associated Pseudomonas stutzeri A1501.

Authors:  Yongliang Yan; Jian Yang; Yuetan Dou; Ming Chen; Shuzhen Ping; Junping Peng; Wei Lu; Wei Zhang; Ziying Yao; Hongquan Li; Wei Liu; Sheng He; Lizhao Geng; Xiaobing Zhang; Fan Yang; Haiying Yu; Yuhua Zhan; Danhua Li; Zhanglin Lin; Yiping Wang; Claudine Elmerich; Min Lin; Qi Jin
Journal:  Proc Natl Acad Sci U S A       Date:  2008-05-21       Impact factor: 11.205

7.  Characterization of the morphology and genome of an Escherichia coli podovirus.

Authors:  Yuhui Hua; Xiaoping An; Guangqian Pei; Shasha Li; Wei Wang; Xiaomeng Xu; Huahao Fan; Yong Huang; Zhiyi Zhang; Zhiqiang Mi; Jiankui Chen; Jingyun Li; Feixiong Zhang; Yigang Tong
Journal:  Arch Virol       Date:  2014-08-28       Impact factor: 2.574

8.  Microbial communities in long-term, water-flooded petroleum reservoirs with different in situ temperatures in the Huabei Oilfield, China.

Authors:  Yue-Qin Tang; Yan Li; Jie-Yu Zhao; Chang-Qiao Chi; Li-Xin Huang; Han-Ping Dong; Xiao-Lei Wu
Journal:  PLoS One       Date:  2012-03-14       Impact factor: 3.240

9.  Large Preferred Region for Packaging of Bacterial DNA by phiC725A, a Novel Pseudomonas aeruginosa F116-Like Bacteriophage.

Authors:  Christine Pourcel; Cédric Midoux; Yolande Hauck; Gilles Vergnaud; Libera Latino
Journal:  PLoS One       Date:  2017-01-06       Impact factor: 3.240

10.  Characterization of Enterococcus faecalis phage IME-EF1 and its endolysin.

Authors:  Wenhui Zhang; Zhiqiang Mi; Xiuyun Yin; Hang Fan; Xiaoping An; Zhiyi Zhang; Jiankui Chen; Yigang Tong
Journal:  PLoS One       Date:  2013-11-13       Impact factor: 3.240

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  1 in total

1.  A novel temperate phage, vB_PstS-pAN, induced from the naphthalene-degrading bacterium Pseudomonas stutzeri AN10.

Authors:  Zhou Feng; Xinwu Liu; Miaoxiao Wang; Yong Nie; Xiao-Lei Wu
Journal:  Arch Virol       Date:  2021-05-18       Impact factor: 2.685

  1 in total

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