Literature DB >> 33386867

Hongsoonwoonella zoysiae gen. nov., sp. nov., a new member of the family Stappiaceae isolated from a tidal mudflat.

Soon Dong Lee1, In Seop Kim2, Sung-Min Kim3, Hong Lim Yang4, Yeong-Sik Byeon3.   

Abstract

A Gram stain-negative bacterial strain, designated SY4-7T, was isolated from rhizosphere mudflat of a halophyte (Zoysia sinica) collected around Seonyu Island, Republic of Korea. Cells of the organism were strictly aerobic, non-sporulating, non-motile rods and grew at 20-42 °C, pH 6-8 and 1-6% (w/v) NaCl. The 16S rRNA gene-based phylogenetic analyses revealed that strain SY4-7T formed an independent cluster separated from the recognized genera of the family Stappiaceae, which was also supported by phylogenomic analysis-based 92-core gene sequences. The type stains of the phylogenetically closest relatives were Stappia indica (95.6% sequence similarity), Stappia stellulata (95.1%) and Roseibium hamelinense (95.1%). The isoprenoid quinone was Q-10. The polar lipids consisted of phosphatidylcholine, phosphatidylethanolamine, phosphatidylglycerol, three unidentified aminophospholipids, an unidentified phosphoglycolipid, an unidentified aminolipid, two unidentified phospholipids and an unidentified lipid. The major cellular fatty acids are C18:1ω7c and C19:1 cyclo ω8c. The G + C content of the genomic DNA is 60.7%. Discrimination of the organism from all the recognized genera of the family Stappiaceae was apparent by the chemotaxonomic and phylogenetic features. Based on the results presented here, strain SY4-7T (= KCTC 72226T = NBRC 113902T) represents a novel species of a new genus in the family Stappiaceae, for which the name Hongsoonwoonella zoysiae sp. nov. is proposed.

Entities:  

Keywords:  16S rRNA gene; Core genes; Genome feature; Hongsoonwoonella zoysiae; Rhizosphere mudflat; Stappiaceae; Zoysia sinica

Year:  2021        PMID: 33386867     DOI: 10.1007/s00203-020-02083-8

Source DB:  PubMed          Journal:  Arch Microbiol        ISSN: 0302-8933            Impact factor:   2.552


  32 in total

1.  Pannonibacter phragmitetus gen. nov., sp. nov., a novel alkalitolerant bacterium isolated from decomposing reed rhizomes in a Hungarian soda lake.

Authors:  Andrea K Borsodi; Adrienn Micsinai; Gábor Kovács; Erika Tóth; Peter Schumann; Attila L Kovács; Béla Böddi; Károly Márialigeti
Journal:  Int J Syst Evol Microbiol       Date:  2003-03       Impact factor: 2.747

2.  Labrenzia suaedae sp. nov., a marine bacterium isolated from a halophyte, and emended description of the genus Labrenzia.

Authors:  Fehmida Bibi; Jae Heon Jeong; Eu Jin Chung; Che Ok Jeon; Young Ryun Chung
Journal:  Int J Syst Evol Microbiol       Date:  2014-01-09       Impact factor: 2.747

3.  Soil and sediment bacteria capable of aerobic nitrate respiration.

Authors:  J P Carter; Y H Hsaio; S Spiro; D J Richardson
Journal:  Appl Environ Microbiol       Date:  1995-08       Impact factor: 4.792

4.  Evolutionary trees from DNA sequences: a maximum likelihood approach.

Authors:  J Felsenstein
Journal:  J Mol Evol       Date:  1981       Impact factor: 2.395

5.  Rubrimonas shengliensis sp. nov. and Polymorphum gilvum gen. nov., sp. nov., novel members of Alphaproteobacteria from crude oil contaminated saline soil.

Authors:  Man Cai; Lu Wang; Hua Cai; Yan Li; Yue-Qin Tang; Xiao-Lei Wu
Journal:  Syst Appl Microbiol       Date:  2011-05-19       Impact factor: 4.022

6.  Description of Labrenzia alexandrii gen. nov., sp. nov., a novel alphaproteobacterium containing bacteriochlorophyll a, and a proposal for reclassification of Stappia aggregata as Labrenzia aggregata comb. nov., of Stappia marina as Labrenzia marina comb. nov. and of Stappia alba as Labrenzia alba comb. nov., and emended descriptions of the genera Pannonibacter, Stappia and Roseibium, and of the species Roseibium denhamense and Roseibium hamelinense.

Authors:  Hanno Biebl; Rüdiger Pukall; Heinrich Lünsdorf; Stefan Schulz; Martin Allgaier; Brian J Tindall; Irene Wagner-Döbler
Journal:  Int J Syst Evol Microbiol       Date:  2007-05       Impact factor: 2.747

7.  Labrenzia salina sp. nov., isolated from the rhizosphere of the halophyte Arthrocnemum macrostachyum.

Authors:  Maria Camacho; Susana Redondo-Gómez; Ignacio Rodríguez-Llorente; Manfred Rohde; Cathrin Spröer; Peter Schumann; Hans-Peter Klenk; Maria Del Carmen Montero-Calasanz
Journal:  Int J Syst Evol Microbiol       Date:  2016-09-11       Impact factor: 2.747

8.  Nesiotobacter exalbescens gen. nov., sp. nov., a moderately thermophilic alphaproteobacterium from an Hawaiian hypersaline lake.

Authors:  Stuart P Donachie; John P Bowman; Maqsudul Alam
Journal:  Int J Syst Evol Microbiol       Date:  2006-03       Impact factor: 2.747

9.  Roseibium aestuarii sp. nov., isolated from Pearl River Estuary.

Authors:  Li Duan; Jia-Ling Li; Xin Li; Lei Dong; Bao-Zhu Fang; Min Xiao; Xiaozhen Mou; Wen-Jun Li
Journal:  Int J Syst Evol Microbiol       Date:  2020-03-25       Impact factor: 2.747

10.  Pannonibacter indica sp. nov., a highly arsenate-tolerant bacterium isolated from a hot spring in India.

Authors:  Saumya Bandyopadhyay; Peter Schumann; Subrata K Das
Journal:  Arch Microbiol       Date:  2012-09-01       Impact factor: 2.552

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.