Literature DB >> 3337814

Spectroscopic and ionization properties of N-(7-nitrobenz-2-oxa-1,3-diazol-4-yl)-labeled lipids in model membranes.

A Chattopadhyay1, E London.   

Abstract

The spectroscopic and ionization properties of various lipids labeled with the 7-nitrobenz-2-oxa-1,3-diazol-4-yl (NBD) group have been studied in model membranes using fluorescence, absorbance and electrophoretic mobility measurements. Electrophoretic measurements show that the NBD group is uncharged at neutral pH. However, at high pH, hydroxyl addition or deprotonation occurs with a pKa, depending upon conditions, of 11.5-11.8 for the NBD group of headgroup-labeled phosphatidylethanolamine (NBD-PE) and 11.1-11.5 for NBD labels placed at the end of one fatty acyl chain of a phosphatidylcholine (6-NBD-PC and 12-NBD-PC). This type of behavior is not observed in the case of a methylated NBD label placed in the flexible 'tail' of cholesterol (NBD-cholesterol). The similarity in pKa for NBD-PE and NBD-PCs suggests that in these cases the NBD group is at a similar depth in the membrane. This was examined further by comparison of the fluorescence emission maximum of the NBD group in model membranes with that in solvents of varying polarity. The apparent polarity experienced by NBD groups in model membranes indicates that for NBD-PE and 12-NBD-PC they are located at the polar region whereas the NBD group of NBD-cholesterol is deeply buried in a nonpolar region of the membrane. This conclusion is supported further by fluorescence quenching experiments measuring NBD exposure to the aqueous quencher Co2+. The results of this study confirm the tentative conclusions of our previous fluorescence quenching studies on the location of NBD groups in model membranes.

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Year:  1988        PMID: 3337814     DOI: 10.1016/0005-2736(88)90118-6

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  26 in total

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2.  Ionization, partitioning, and dynamics of tryptophan octyl ester: implications for membrane-bound tryptophan residues.

Authors:  A Chattopadhyay; S Mukherjee; R Rukmini; S S Rawat; S Sudha
Journal:  Biophys J       Date:  1997-08       Impact factor: 4.033

3.  Orientation and dynamics of melittin in membranes of varying composition utilizing NBD fluorescence.

Authors:  H Raghuraman; Amitabha Chattopadhyay
Journal:  Biophys J       Date:  2006-11-17       Impact factor: 4.033

4.  Bioorthogonal probes for imaging sterols in cells.

Authors:  Cindy Y Jao; Daniel Nedelcu; Lyle V Lopez; Thilani N Samarakoon; Ruth Welti; Adrian Salic
Journal:  Chembiochem       Date:  2015-02-06       Impact factor: 3.164

5.  Synergistic effects of the membrane actions of cecropin-melittin antimicrobial hybrid peptide BP100.

Authors:  Rafael Ferre; Manuel N Melo; Ana D Correia; Lidia Feliu; Eduard Bardají; Marta Planas; Miguel Castanho
Journal:  Biophys J       Date:  2009-03-04       Impact factor: 4.033

6.  Wavelength-selective fluorescence as a novel tool to study organization and dynamics in complex biological systems.

Authors:  S Mukherjee; A Chattopadhyay
Journal:  J Fluoresc       Date:  1995-09       Impact factor: 2.217

7.  Nonequilibrium phenomena in the phase separation of a two-component lipid bilayer.

Authors:  Rodrigo F M de Almeida; Luís M S Loura; Aleksandre Fedorov; Manuel Prieto
Journal:  Biophys J       Date:  2002-02       Impact factor: 4.033

8.  Correlated fluorescence-atomic force microscopy of membrane domains: structure of fluorescence probes determines lipid localization.

Authors:  James E Shaw; Raquel F Epand; Richard M Epand; Zaiguo Li; Robert Bittman; Christopher M Yip
Journal:  Biophys J       Date:  2005-12-16       Impact factor: 4.033

Review 9.  Fluorescent analogs of biomolecular building blocks: design, properties, and applications.

Authors:  Renatus W Sinkeldam; Nicholas J Greco; Yitzhak Tor
Journal:  Chem Rev       Date:  2010-05-12       Impact factor: 60.622

10.  Protonation dynamics of the alpha-toxin ion channel from spectral analysis of pH-dependent current fluctuations.

Authors:  J J Kasianowicz; S M Bezrukov
Journal:  Biophys J       Date:  1995-07       Impact factor: 4.033

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