Literature DB >> 9251800

Ionization, partitioning, and dynamics of tryptophan octyl ester: implications for membrane-bound tryptophan residues.

A Chattopadhyay1, S Mukherjee, R Rukmini, S S Rawat, S Sudha.   

Abstract

The presence of tryptophan residues as intrinsic fluorophores in most proteins makes them an obvious choice for fluorescence spectroscopic analyses of such proteins. Membrane proteins have been reported to have a significantly higher tryptophan content than soluble proteins. The role of tryptophan residues in the structure and function of membrane proteins has attracted a lot of attention. Tryptophan residues in membrane proteins and peptides are believed to be distributed asymmetrically toward the interfacial region. Tryptophan octyl ester (TOE) is an important model for membrane-bound tryptophan residues. We have characterized this molecule as a fluorescent membrane probe in terms of its ionization, partitioning, and motional characteristics in unilamellar vesicles of dioleoylphosphatidylcholine. The ionization property of this molecule in model membranes has been studied by utilizing its pH-dependent fluorescence characteristics. Analysis of pH-dependent fluorescence intensity and emission maximum shows that deprotonation of the alpha-amino group of TOE occurs with an apparent pKa of approximately 7.5 in the membrane. The fluorescence lifetime of membrane-bound TOE also shows pH dependence. The fluorescence lifetimes of TOE have been interpreted by using the rotamer model for the fluorescence decay of tryptophan. Membrane/water partition coefficients of TOE were measured in both its protonated and deprotonated forms. No appreciable difference was found in its partitioning behavior with ionization. Analysis of fluorescence polarization of TOE as a function of pH showed that there is a decrease in polarization with increasing pH, implying more rotational freedom on deprotonation. This is further supported by pH-dependent red edge excitation shift and the apparent rotational correlation time of membrane-bound TOE. TOE should prove useful in monitoring the organization and dynamics of tryptophan residues incorporated into membranes.

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Year:  1997        PMID: 9251800      PMCID: PMC1180980          DOI: 10.1016/S0006-3495(97)78116-5

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  70 in total

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Journal:  Biophys J       Date:  1996-06       Impact factor: 4.033

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Journal:  Biochem Biophys Res Commun       Date:  1991-11-27       Impact factor: 3.575

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Journal:  Biophys J       Date:  1995-08       Impact factor: 4.033

9.  Partition of amphiphilic molecules into phospholipid vesicles and human erythrocyte ghosts: measurements by ultraviolet difference spectroscopy.

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Journal:  Biochemistry       Date:  1984-12-04       Impact factor: 3.162

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Journal:  Proc Natl Acad Sci U S A       Date:  1994-11-22       Impact factor: 11.205

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  12 in total

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Journal:  Biophys J       Date:  2004-10       Impact factor: 4.033

2.  Nanosecond dynamics of a mimicked membrane-water interface observed by time-resolved stokes shift of LAURDAN.

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Journal:  Biophys J       Date:  2005-03-18       Impact factor: 4.033

3.  Dynamics of a membrane-bound tryptophan analog in environments of varying hydration: a fluorescence approach.

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4.  Tryptophan octyl ester in detergent micelles of dodecylmaltoside: fluorescence properties and quenching by brominated detergent analogs.

Authors:  B de Foresta; J Gallay; J Sopkova; P Champeil; M Vincent
Journal:  Biophys J       Date:  1999-12       Impact factor: 4.033

5.  Tryptophan rotamer distributions in amphipathic peptides at a lipid surface.

Authors:  A H Clayton; W H Sawyer
Journal:  Biophys J       Date:  1999-06       Impact factor: 4.033

6.  Membrane organization and dynamics of "inner pair" and "outer pair" tryptophan residues in gramicidin channels.

Authors:  Sourav Haldar; Arunima Chaudhuri; Hong Gu; Roger E Koeppe; Mamata Kombrabail; G Krishnamoorthy; Amitabha Chattopadhyay
Journal:  J Phys Chem B       Date:  2012-08-30       Impact factor: 2.991

7.  Localization and environment of tryptophans in soluble and membrane-bound states of a pore-forming toxin from Staphylococcus aureus.

Authors:  S M Raja; S S Rawat; A Chattopadhyay; A K Lala
Journal:  Biophys J       Date:  1999-03       Impact factor: 4.033

8.  Organization and dynamics of tryptophan residues in erythroid spectrin: novel structural features of denatured spectrin revealed by the wavelength-selective fluorescence approach.

Authors:  Amitabha Chattopadhyay; Satinder S Rawat; Devaki A Kelkar; Sibnath Ray; Abhijit Chakrabarti
Journal:  Protein Sci       Date:  2003-11       Impact factor: 6.725

9.  Hydrogen bonding and solvent polarity markers in the uv resonance raman spectrum of tryptophan: application to membrane proteins.

Authors:  Diana E Schlamadinger; Jonathan E Gable; Judy E Kim
Journal:  J Phys Chem B       Date:  2009-11-05       Impact factor: 2.991

10.  Importance of indole N-H hydrogen bonding in the organization and dynamics of gramicidin channels.

Authors:  Arunima Chaudhuri; Sourav Haldar; Haiyan Sun; Roger E Koeppe; Amitabha Chattopadhyay
Journal:  Biochim Biophys Acta       Date:  2013-10-19
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