Literature DB >> 33375220

A Conformation Variant of p53 Combined with Machine Learning Identifies Alzheimer Disease in Preclinical and Prodromal Stages.

Giulia Abate1, Marika Vezzoli1, Letizia Polito2, Antonio Guaita2, Diego Albani3, Moira Marizzoni4, Emirena Garrafa1, Alessandra Marengoni5, Gianluigi Forloni3, Giovanni B Frisoni6, Jeffrey L Cummings7, Maurizio Memo1, Daniela Uberti1,8.   

Abstract

Early diagnosis of Alzheimer's disease (AD) is a crucial starting point in disease management. Blood-based biomarkers could represent a considerable advantage in providing AD-risk information in primary care settings. Here, we report new data for a relatively unknown blood-based biomarker that holds promise for AD diagnosis. We evaluate a p53-misfolding conformation recognized by the antibody 2D3A8, also named Unfolded p53 (U-p532D3A8+), in 375 plasma samples derived from InveCe.Ab and PharmaCog/E-ADNI longitudinal studies. A machine learning approach is used to combine U-p532D3A8+ plasma levels with Mini-Mental State Examination (MMSE) and apolipoprotein E epsilon-4 (APOEε4) and is able to predict AD likelihood risk in InveCe.Ab with an overall 86.67% agreement with clinical diagnosis. These algorithms also accurately classify (AUC = 0.92) Aβ+-amnestic Mild Cognitive Impairment (aMCI) patients who will develop AD in PharmaCog/E-ADNI, where subjects were stratified according to Cerebrospinal fluid (CSF) AD markers (Aβ42 and p-Tau). Results support U-p532D3A8+ plasma level as a promising additional candidate blood-based biomarker for AD.

Entities:  

Keywords:  Alzheimer’s disease; blood-based biomarker; conformation variant of p53; machine learning; β-amyloid

Year:  2020        PMID: 33375220      PMCID: PMC7823360          DOI: 10.3390/jpm11010014

Source DB:  PubMed          Journal:  J Pers Med        ISSN: 2075-4426


  47 in total

1.  The diagnosis of dementia due to Alzheimer's disease: recommendations from the National Institute on Aging-Alzheimer's Association workgroups on diagnostic guidelines for Alzheimer's disease.

Authors:  Guy M McKhann; David S Knopman; Howard Chertkow; Bradley T Hyman; Clifford R Jack; Claudia H Kawas; William E Klunk; Walter J Koroshetz; Jennifer J Manly; Richard Mayeux; Richard C Mohs; John C Morris; Martin N Rossor; Philip Scheltens; Maria C Carrillo; Bill Thies; Sandra Weintraub; Creighton H Phelps
Journal:  Alzheimers Dement       Date:  2011-04-21       Impact factor: 21.566

2.  The diagnosis of mild cognitive impairment due to Alzheimer's disease: recommendations from the National Institute on Aging-Alzheimer's Association workgroups on diagnostic guidelines for Alzheimer's disease.

Authors:  Marilyn S Albert; Steven T DeKosky; Dennis Dickson; Bruno Dubois; Howard H Feldman; Nick C Fox; Anthony Gamst; David M Holtzman; William J Jagust; Ronald C Petersen; Peter J Snyder; Maria C Carrillo; Bill Thies; Creighton H Phelps
Journal:  Alzheimers Dement       Date:  2011-04-21       Impact factor: 21.566

3.  Phase 3 trials of solanezumab and bapineuzumab for Alzheimer's disease.

Authors:  Rachelle S Doody; Martin Farlow; Paul S Aisen
Journal:  N Engl J Med       Date:  2014-04-10       Impact factor: 91.245

4.  p53 isoforms regulate astrocyte-mediated neuroprotection and neurodegeneration.

Authors:  C Turnquist; I Horikawa; E Foran; E O Major; B Vojtesek; D P Lane; X Lu; B T Harris; C C Harris
Journal:  Cell Death Differ       Date:  2016-04-22       Impact factor: 15.828

5.  CSF biomarkers and incipient Alzheimer disease in patients with mild cognitive impairment.

Authors:  Niklas Mattsson; Henrik Zetterberg; Oskar Hansson; Niels Andreasen; Lucilla Parnetti; Michael Jonsson; Sanna-Kaisa Herukka; Wiesje M van der Flier; Marinus A Blankenstein; Michael Ewers; Kenneth Rich; Elmar Kaiser; Marcel Verbeek; Magda Tsolaki; Ezra Mulugeta; Erik Rosén; Dag Aarsland; Pieter Jelle Visser; Johannes Schröder; Jan Marcusson; Mony de Leon; Harald Hampel; Philip Scheltens; Tuula Pirttilä; Anders Wallin; Maria Eriksdotter Jönhagen; Lennart Minthon; Bengt Winblad; Kaj Blennow
Journal:  JAMA       Date:  2009-07-22       Impact factor: 56.272

6.  Conformationally altered p53: a novel Alzheimer's disease marker?

Authors:  C Lanni; M Racchi; G Mazzini; A Ranzenigo; R Polotti; E Sinforiani; L Olivari; M Barcikowska; M Styczynska; J Kuznicki; A Szybinska; S Govoni; M Memo; D Uberti
Journal:  Mol Psychiatry       Date:  2007-08-07       Impact factor: 15.992

7.  Conformational altered p53 as an early marker of oxidative stress in Alzheimer's disease.

Authors:  Laura Buizza; Giovanna Cenini; Cristina Lanni; Giulia Ferrari-Toninelli; Chiara Prandelli; Stefano Govoni; Erica Buoso; Marco Racchi; Maria Barcikowska; Maria Styczynska; Aleksandra Szybinska; David Allan Butterfield; Maurizio Memo; Daniela Uberti
Journal:  PLoS One       Date:  2012-01-05       Impact factor: 3.240

8.  CHIP stabilizes amyloid precursor protein via proteasomal degradation and p53-mediated trans-repression of β-secretase.

Authors:  Amir Kumar Singh; Uttam Pati
Journal:  Aging Cell       Date:  2015-03-13       Impact factor: 9.304

9.  High-precision plasma β-amyloid 42/40 predicts current and future brain amyloidosis.

Authors:  Suzanne E Schindler; James G Bollinger; Vitaliy Ovod; Kwasi G Mawuenyega; Yan Li; Brian A Gordon; David M Holtzman; John C Morris; Tammie L S Benzinger; Chengjie Xiong; Anne M Fagan; Randall J Bateman
Journal:  Neurology       Date:  2019-08-01       Impact factor: 11.800

10.  Machine learning for comprehensive forecasting of Alzheimer's Disease progression.

Authors:  Charles K Fisher; Aaron M Smith; Jonathan R Walsh
Journal:  Sci Rep       Date:  2019-09-20       Impact factor: 4.379

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  6 in total

Review 1.  Post-translational Modifications of the p53 Protein and the Impact in Alzheimer's Disease: A Review of the Literature.

Authors:  James S Clark; Rakez Kayed; Giulia Abate; Daniela Uberti; Paul Kinnon; Simona Piccirella
Journal:  Front Aging Neurosci       Date:  2022-04-28       Impact factor: 5.702

Review 2.  Aducanumab Therapy to Treat Alzheimer's Disease: A Narrative Review.

Authors:  Semira Abdi Beshir; A M Aadithsoorya; Affana Parveen; Sheron Sir Loon Goh; Nadia Hussain; Vineetha Bharathan Menon
Journal:  Int J Alzheimers Dis       Date:  2022-03-09

Review 3.  The Road to Personalized Medicine in Alzheimer's Disease: The Use of Artificial Intelligence.

Authors:  Anuschka Silva-Spínola; Inês Baldeiras; Joel P Arrais; Isabel Santana
Journal:  Biomedicines       Date:  2022-01-29

4.  Modified Low-Temperature Extraction Method for Isolation of Bletilla striata Polysaccharide as Antioxidant for the Prevention of Alzheimer's Disease.

Authors:  Yi-Wen Lin; Chih-Hsiang Fang; Ya-Jyun Liang; Hong-Hsiang Liao; Feng-Huei Lin
Journal:  Int J Mol Sci       Date:  2021-11-25       Impact factor: 5.923

Review 5.  Inflammation in the CNS: Understanding Various Aspects of the Pathogenesis of Alzheimer's Disease.

Authors:  Julia Doroszkiewicz; Piotr Mroczko; Agnieszka Kulczyńska-Przybik
Journal:  Curr Alzheimer Res       Date:  2022       Impact factor: 3.040

6.  Machine Learning and Novel Biomarkers for the Diagnosis of Alzheimer's Disease.

Authors:  Chun-Hung Chang; Chieh-Hsin Lin; Hsien-Yuan Lane
Journal:  Int J Mol Sci       Date:  2021-03-09       Impact factor: 5.923

  6 in total

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