Literature DB >> 33375072

Chromosomal Analysis in Crotophaga ani (Aves, Cuculiformes) Reveals Extensive Genomic Reorganization and an Unusual Z-Autosome Robertsonian Translocation.

Rafael Kretschmer1,2, Ricardo José Gunski3, Analía Del Valle Garnero3, Thales Renato Ochotorena de Freitas2, Gustavo Akira Toma4, Marcelo de Bello Cioffi4, Edivaldo Herculano Corrêa de Oliveira5,6, Rebecca E O'Connor1, Darren K Griffin1.   

Abstract

Although cytogenetics studies in cuckoos (Aves, Cuculiformes) have demonstrated an interesting karyotype variation, such as variations in the chromosome morphology and diploid number, their chromosome organization and evolution, and relation with other birds are poorly understood. Hence, we combined conventional and molecular cytogenetic approaches to investigate chromosome homologies between chicken and the smooth-billed ani (Crotophaga ani). Our results demonstrate extensive chromosome reorganization in C. ani, with interchromosomal rearrangements involving macro and microchromosomes. Intrachromosomal rearrangements were observed in some macrochromosomes, including the Z chromosome. The most evolutionary notable finding was a Robertsonian translocation between the microchromosome 17 and the Z chromosome, a rare event in birds. Additionally, the simple short repeats (SSRs) tested here were preferentially accumulated in the microchromosomes and in the Z and W chromosomes, showing no relationship with the constitutive heterochromatin regions, except in the W chromosome. Taken together, our results suggest that the avian sex chromosome is more complex than previously postulated and revealed the role of microchromosomes in the avian sex chromosome evolution, especially cuckoos.

Entities:  

Keywords:  birds; chromosomal rearrangements; genome evolution; sex chromosomes

Mesh:

Year:  2020        PMID: 33375072      PMCID: PMC7822047          DOI: 10.3390/cells10010004

Source DB:  PubMed          Journal:  Cells        ISSN: 2073-4409            Impact factor:   6.600


  44 in total

1.  Conservation of avian Z chromosomes as revealed by comparative mapping of the Z-linked aldolase B gene.

Authors:  I Nanda; M Schmid
Journal:  Cytogenet Genome Res       Date:  2002       Impact factor: 1.636

2.  Cytogenetic and phenotypic effects of a chromosomal rearrangement involving the Z-chromosome and micro-chromosome in the chicken.

Authors:  R V Telloni; R G Jaap; N S Fechheimer
Journal:  Poult Sci       Date:  1976-09       Impact factor: 3.352

3.  Meiotic behaviour of evolutionary sex-autosome translocations in Bovidae.

Authors:  Miluse Vozdova; Aurora Ruiz-Herrera; Jonathan Fernandez; Halina Cernohorska; Jan Frohlich; Hana Sebestova; Svatava Kubickova; Jiri Rubes
Journal:  Chromosome Res       Date:  2016-04-30       Impact factor: 5.239

4.  The evolution of the avian genome as revealed by comparative molecular cytogenetics.

Authors:  D K Griffin; L B W Robertson; H G Tempest; B M Skinner
Journal:  Cytogenet Genome Res       Date:  2007       Impact factor: 1.636

5.  Mechanisms and evolutionary patterns of mammalian and avian dosage compensation.

Authors:  Philippe Julien; David Brawand; Magali Soumillon; Anamaria Necsulea; Angélica Liechti; Frédéric Schütz; Tasman Daish; Frank Grützner; Henrik Kaessmann
Journal:  PLoS Biol       Date:  2012-05-15       Impact factor: 8.029

6.  General lack of global dosage compensation in ZZ/ZW systems? Broadening the perspective with RNA-seq.

Authors:  Jochen Bw Wolf; Jarosław Bryk
Journal:  BMC Genomics       Date:  2011-02-01       Impact factor: 3.969

7.  Dosage compensation is less effective in birds than in mammals.

Authors:  Yuichiro Itoh; Esther Melamed; Xia Yang; Kathy Kampf; Susanna Wang; Nadir Yehya; Atila Van Nas; Kirstin Replogle; Mark R Band; David F Clayton; Eric E Schadt; Aldons J Lusis; Arthur P Arnold
Journal:  J Biol       Date:  2007

8.  The distribution of 45S rDNA sites in bird chromosomes suggests multiple evolutionary histories.

Authors:  Tiago Marafiga Degrandi; Ricardo José Gunski; Analía Del Valle Garnero; Edivaldo Herculano Correa de Oliveira; Rafael Kretschmer; Marcelo Santos de Souza; Suziane Alves Barcellos; Iris Hass
Journal:  Genet Mol Biol       Date:  2020-03-30       Impact factor: 1.771

9.  Faced with inequality: chicken do not have a general dosage compensation of sex-linked genes.

Authors:  Hans Ellegren; Lina Hultin-Rosenberg; Björn Brunström; Lennart Dencker; Kim Kultima; Birger Scholz
Journal:  BMC Biol       Date:  2007-09-20       Impact factor: 7.431

10.  Chromosome-level assembly reveals extensive rearrangement in saker falcon and budgerigar, but not ostrich, genomes.

Authors:  Rebecca E O'Connor; Marta Farré; Sunitha Joseph; Joana Damas; Lucas Kiazim; Rebecca Jennings; Sophie Bennett; Eden A Slack; Emily Allanson; Denis M Larkin; Darren K Griffin
Journal:  Genome Biol       Date:  2018-10-24       Impact factor: 13.583

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  8 in total

1.  ACC2 is under-expressed in lung adenocarcinoma and predicts poor clinical outcomes.

Authors:  Fei-Yuan Yu; Qian Xu; Qi-Yao Wei; Hai-Ying Mo; Qiu-Hua Zhong; Xiao-Yun Zhao; Andy T Y Lau; Yan-Ming Xu
Journal:  J Cancer Res Clin Oncol       Date:  2022-01-22       Impact factor: 4.322

2.  Avian Neo-Sex Chromosomes Reveal Dynamics of Recombination Suppression and W Degeneration.

Authors:  Hanna Sigeman; Maria Strandh; Estelle Proux-Wéra; Verena E Kutschera; Suvi Ponnikas; Hongkai Zhang; Max Lundberg; Lucile Soler; Ignas Bunikis; Maja Tarka; Dennis Hasselquist; Björn Nystedt; Helena Westerdahl; Bengt Hansson
Journal:  Mol Biol Evol       Date:  2021-12-09       Impact factor: 16.240

3.  Cytogenetic Evidence Clarifies the Phylogeny of the Family Rhynchocyclidae (Aves: Passeriformes).

Authors:  Rafael Kretschmer; Ismael Franz; Marcelo Santos de Souza; Analía Del Valle Garnero; Ricardo José Gunski; Edivaldo Herculano Corrêa de Oliveira; Rebecca E O'Connor; Darren K Griffin; Thales Renato Ochotorena de Freitas
Journal:  Cells       Date:  2021-10-04       Impact factor: 6.600

4.  Genome Stability Is in the Eye of the Beholder: CR1 Retrotransposon Activity Varies Significantly across Avian Diversity.

Authors:  James D Galbraith; Robert Daniel Kortschak; Alexander Suh; David L Adelson
Journal:  Genome Biol Evol       Date:  2021-12-01       Impact factor: 3.416

5.  Recurrent chromosome reshuffling and the evolution of neo-sex chromosomes in parrots.

Authors:  Zhen Huang; Ivanete De O Furo; Jing Liu; Valentina Peona; Anderson J B Gomes; Wan Cen; Hao Huang; Yanding Zhang; Duo Chen; Ting Xue; Qiujin Zhang; Zhicao Yue; Quanxi Wang; Lingyu Yu; Youling Chen; Alexander Suh; Edivaldo H C de Oliveira; Luohao Xu
Journal:  Nat Commun       Date:  2022-02-17       Impact factor: 17.694

6.  Comparative chromosome maps between the stone curlew and three ciconiiform species (the grey heron, little egret and crested ibis).

Authors:  Jinhuan Wang; Weiting Su; Yi Hu; Shengbin Li; Patricia C M O'Brien; Malcolm A Ferguson-Smith; Fengtang Yang; Wenhui Nie
Journal:  BMC Ecol Evol       Date:  2022-03-03

7.  Extreme variation in recombination rate and genetic diversity along the Sylvioidea neo-sex chromosome.

Authors:  Suvi Ponnikas; Hanna Sigeman; Max Lundberg; Bengt Hansson
Journal:  Mol Ecol       Date:  2022-06-06       Impact factor: 6.622

8.  Karyotype Evolution and Genomic Organization of Repetitive DNAs in the Saffron Finch, Sicalis flaveola (Passeriformes, Aves).

Authors:  Rafael Kretschmer; Benilson Silva Rodrigues; Suziane Alves Barcellos; Alice Lemos Costa; Marcelo de Bello Cioffi; Analía Del Valle Garnero; Ricardo José Gunski; Edivaldo Herculano Corrêa de Oliveira; Darren K Griffin
Journal:  Animals (Basel)       Date:  2021-05-19       Impact factor: 2.752

  8 in total

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