Literature DB >> 33374016

5' UTR CGG repeat expansion in GIPC1 is associated with oculopharyngodistal myopathy.

Jianying Xi1, Xilu Wang2, Dongyue Yue3, Tonghai Dou2, Qunfeng Wu2, Jun Lu1, Yiqi Liu1, Wenbo Yu1, Kai Qiao1, Jie Lin1, Sushan Luo1, Jing Li4, Ailian Du5, Jihong Dong6, Yan Chen7, Lijun Luo8, Jie Yang8, Zhenmin Niu9, Zonghui Liang4, Chongbo Zhao1, Jiahong Lu1, Wenhua Zhu1, Yan Zhou2,9.   

Abstract

Oculopharyngodistal myopathy is a late-onset degenerative muscle disorder characterized by ptosis and weakness of the facial, pharyngeal, and distal limb muscles. A recent report suggested a non-coding trinucleotide repeat expansion in LRP12 to be associated with the disease. Here we report a genetic study in a Chinese cohort of 41 patients with the clinical diagnosis of oculopharyngodistal myopathy (21 cases from seven families and 20 sporadic cases). In a large family with 12 affected individuals, combined haplotype and linkage analysis revealed a maximum two-point logarithm of the odds (LOD) score of 3.3 in chromosomal region chr19p13.11-p13.2 and narrowed the candidate region to an interval of 4.5 Mb. Using a comprehensive strategy combining whole-exome sequencing, long-read sequencing, repeat-primed polymerase chain reaction and GC-rich polymerase chain reaction, we identified an abnormal CGG repeat expansion in the 5' UTR of the GIPC1 gene that co-segregated with disease. Overall, the repeat expansion in GIPC1 was identified in 51.9% independent pedigrees (4/7 families and 10/20 sporadic cases), while the repeat expansion in LRP12 was only identified in one sporadic case (3.7%) in our cohort. The number of CGG repeats was <30 in controls but >60 in affected individuals. There was a slight correlation between repeat size and the age at onset. Both repeat expansion and retraction were observed during transmission but somatic instability was not evident. These results further support that non-coding CGG repeat expansion plays an essential role in the pathogenesis of oculopharyngodistal myopathy.
© The Author(s) (2020). Published by Oxford University Press on behalf of the Guarantors of Brain. All rights reserved. For permissions, please email: journals.permissions@oup.com.

Entities:  

Keywords:  zzm321990 GIPC1zzm321990 ; CGG repeat expansion; long-read sequencing; muscle imaging; oculopharyngodistal myopathy

Mesh:

Substances:

Year:  2021        PMID: 33374016     DOI: 10.1093/brain/awaa426

Source DB:  PubMed          Journal:  Brain        ISSN: 0006-8950            Impact factor:   13.501


  10 in total

1.  CGG repeat expansion in NOTCH2NLC causes mitochondrial dysfunction and progressive neurodegeneration in Drosophila model.

Authors:  Jiaxi Yu; Tongling Liufu; Yilei Zheng; Jin Xu; Lingchao Meng; Wei Zhang; Yun Yuan; Daojun Hong; Nicolas Charlet-Berguerand; Zhaoxia Wang; Jianwen Deng
Journal:  Proc Natl Acad Sci U S A       Date:  2022-10-03       Impact factor: 12.779

2.  The CGG repeat expansion in RILPL1 is associated with oculopharyngodistal myopathy type 4.

Authors:  Jiaxi Yu; Jingli Shan; Meng Yu; Li Di; Zhiying Xie; Wei Zhang; He Lv; Lingchao Meng; Yiming Zheng; Yawen Zhao; Qiang Gang; Xueyu Guo; Yang Wang; Jianying Xi; Wenhua Zhu; Yuwei Da; Daojun Hong; Yun Yuan; Chuanzhu Yan; Zhaoxia Wang; Jianwen Deng
Journal:  Am J Hum Genet       Date:  2022-02-10       Impact factor: 11.043

3.  GGC repeat expansions in NOTCH2NLC causing a phenotype of distal motor neuropathy and myopathy.

Authors:  Jiaxi Yu; Xing-Hua Luan; Meng Yu; Wei Zhang; He Lv; Li Cao; Lingchao Meng; Min Zhu; Binbin Zhou; Xiao-Rong Wu; Pidong Li; Qiang Gang; Jing Liu; Xin Shi; Wei Liang; Zhirong Jia; Sheng Yao; Yun Yuan; Jianwen Deng; Daojun Hong; Zhaoxia Wang
Journal:  Ann Clin Transl Neurol       Date:  2021-05-04       Impact factor: 4.511

Review 4.  An update on the neurological short tandem repeat expansion disorders and the emergence of long-read sequencing diagnostics.

Authors:  Sanjog R Chintalaphani; Sandy S Pineda; Ira W Deveson; Kishore R Kumar
Journal:  Acta Neuropathol Commun       Date:  2021-05-25       Impact factor: 7.801

5.  Translation of GGC repeat expansions into a toxic polyglycine protein in NIID defines a novel class of human genetic disorders: The polyG diseases.

Authors:  Manon Boivin; Jianwen Deng; Véronique Pfister; Erwan Grandgirard; Mustapha Oulad-Abdelghani; Bastien Morlet; Frank Ruffenach; Luc Negroni; Pascale Koebel; Hugues Jacob; Fabrice Riet; Anke A Dijkstra; Kathryn McFadden; Wiley A Clayton; Daojun Hong; Hiroaki Miyahara; Yasushi Iwasaki; Jun Sone; Zhaoxia Wang; Nicolas Charlet-Berguerand
Journal:  Neuron       Date:  2021-04-21       Impact factor: 17.173

Review 6.  Trinucleotide CGG Repeat Diseases: An Expanding Field of Polyglycine Proteins?

Authors:  Manon Boivin; Nicolas Charlet-Berguerand
Journal:  Front Genet       Date:  2022-02-28       Impact factor: 4.599

7.  Comprehensive genetic diagnosis of tandem repeat expansion disorders with programmable targeted nanopore sequencing.

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Review 8.  Uncovering Essential Tremor Genetics: The Promise of Long-Read Sequencing.

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Review 9.  The genetic and molecular features of the intronic pentanucleotide repeat expansion in spinocerebellar ataxia type 10.

Authors:  Tatsuaki Kurosaki; Tetsuo Ashizawa
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Review 10.  Deciphering Neurodegenerative Diseases Using Long-Read Sequencing.

Authors:  Yun Su; Liyuan Fan; Changhe Shi; Tai Wang; Huimin Zheng; Haiyang Luo; Shuo Zhang; Zhengwei Hu; Yu Fan; Yali Dong; Jing Yang; Chengyuan Mao; Yuming Xu
Journal:  Neurology       Date:  2021-08-13       Impact factor: 9.910

  10 in total

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