Literature DB >> 35148830

The CGG repeat expansion in RILPL1 is associated with oculopharyngodistal myopathy type 4.

Jiaxi Yu1, Jingli Shan2, Meng Yu3, Li Di4, Zhiying Xie3, Wei Zhang3, He Lv3, Lingchao Meng3, Yiming Zheng3, Yawen Zhao3, Qiang Gang3, Xueyu Guo5, Yang Wang5, Jianying Xi6, Wenhua Zhu6, Yuwei Da4, Daojun Hong7, Yun Yuan3, Chuanzhu Yan2, Zhaoxia Wang8, Jianwen Deng9.   

Abstract

Recent studies indicate that CGG repeat expansions in LRP12, GIPC1, and NOTCH2NLC are associated with oculopharyngodistal myopathy (OPDM) types 1, 2, and 3, respectively. However, some clinicopathologically confirmed OPDM cases continue to have unknown genetic causes. Here, through a combination of long-read whole-genome sequencing (LRS), repeat-primed polymerase chain reaction (RP-PCR), and fluorescence amplicon length analysis PCR (AL-PCR), we found that a CGG repeat expansion in the 5' UTR of RILPL1 is associated with familial and simplex OPDM type 4 (OPDM4). The number of repeats ranged from 139 to 197. Methylation analysis indicates that the methylation levels in RILPL1 were unaltered in OPDM4 individuals. Analyses of muscle biopsies suggested that the expanded CGG repeat might be translated into a toxic poly-glycine protein that co-localizes with p62 in intranuclear inclusions. Moreover, analyses suggest that the toxic RNA gain-of-function effects also contributed to the pathogenesis of this disease. Intriguingly, all four types of OPDM have been found to be associated with the CGG repeat expansions located in 5' UTRs. This finding suggests that a common pathogenic mechanism, driven by the CGG repeat expansion, might underlie all cases of OPDM.
Copyright © 2022 American Society of Human Genetics. Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  CGG repeat expansion; RILPL1; co-regulation; intranuclear inclusion; long-read whole-genome sequencing; oculopharyngodistal myopathy; polyG disease

Mesh:

Substances:

Year:  2022        PMID: 35148830      PMCID: PMC8948162          DOI: 10.1016/j.ajhg.2022.01.012

Source DB:  PubMed          Journal:  Am J Hum Genet        ISSN: 0002-9297            Impact factor:   11.043


  24 in total

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Journal:  Am J Hum Genet       Date:  2018-12-13       Impact factor: 11.025

3.  Expansion of GGC repeat in the human-specific NOTCH2NLC gene is associated with essential tremor.

Authors:  Qi-Ying Sun; Qian Xu; Yun Tian; Zheng-Mao Hu; Li-Xia Qin; Jin-Xia Yang; Wen Huang; Jin Xue; Jin-Chen Li; Sheng Zeng; Ying Wang; Hao-Xuan Min; Xiao-Yu Chen; Jun-Pu Wang; Bin Xie; Fan Liang; Hai-Nan Zhang; Chun-Yu Wang; Li-Fang Lei; Xin-Xiang Yan; Hong-Wei Xu; Ran-Hui Duan; Kun Xia; Jing-Yu Liu; Hong Jiang; Lu Shen; Ji-Feng Guo; Bei-Sha Tang
Journal:  Brain       Date:  2020-01-01       Impact factor: 13.501

4.  A unique region of RILP distinguishes it from its related proteins in its regulation of lysosomal morphology and interaction with Rab7 and Rab34.

Authors:  Tuanlao Wang; Ka Khuen Wong; Wanjin Hong
Journal:  Mol Biol Cell       Date:  2003-12-10       Impact factor: 4.138

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Authors:  He Lu; Xinhua Luan; Yun Yuan; Mingrui Dong; Weiping Sun; Chuanzhu Yan
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7.  Translation of GGC repeat expansions into a toxic polyglycine protein in NIID defines a novel class of human genetic disorders: The polyG diseases.

Authors:  Manon Boivin; Jianwen Deng; Véronique Pfister; Erwan Grandgirard; Mustapha Oulad-Abdelghani; Bastien Morlet; Frank Ruffenach; Luc Negroni; Pascale Koebel; Hugues Jacob; Fabrice Riet; Anke A Dijkstra; Kathryn McFadden; Wiley A Clayton; Daojun Hong; Hiroaki Miyahara; Yasushi Iwasaki; Jun Sone; Zhaoxia Wang; Nicolas Charlet-Berguerand
Journal:  Neuron       Date:  2021-04-21       Impact factor: 17.173

8.  RAB8, RAB10 and RILPL1 contribute to both LRRK2 kinase-mediated centrosomal cohesion and ciliogenesis deficits.

Authors:  Antonio Jesús Lara Ordónez; Belén Fernández; Elena Fdez; María Romo-Lozano; Jesús Madero-Pérez; Evy Lobbestael; Veerle Baekelandt; Ana Aiastui; Adolfo López de Munaín; Heather L Melrose; Laura Civiero; Sabine Hilfiker
Journal:  Hum Mol Genet       Date:  2019-11-01       Impact factor: 6.150

9.  CGG expansion in NOTCH2NLC is associated with oculopharyngodistal myopathy with neurological manifestations.

Authors:  Masashi Ogasawara; Aritoshi Iida; Theerawat Kumutpongpanich; Ayami Ozaki; Yasushi Oya; Hirofumi Konishi; Akinori Nakamura; Ryuta Abe; Hiroshi Takai; Ritsuko Hanajima; Hiroshi Doi; Fumiaki Tanaka; Hisayoshi Nakamura; Ikuya Nonaka; Zhaoxia Wang; Shinichiro Hayashi; Satoru Noguchi; Ichizo Nishino
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10.  Pathogenic LRRK2 regulates ciliation probability upstream of tau tubulin kinase 2 via Rab10 and RILPL1 proteins.

Authors:  Yuriko Sobu; Paulina S Wawro; Herschel S Dhekne; Wondwossen M Yeshaw; Suzanne R Pfeffer
Journal:  Proc Natl Acad Sci U S A       Date:  2021-03-09       Impact factor: 11.205

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  3 in total

1.  CGG repeat expansion in NOTCH2NLC causes mitochondrial dysfunction and progressive neurodegeneration in Drosophila model.

Authors:  Jiaxi Yu; Tongling Liufu; Yilei Zheng; Jin Xu; Lingchao Meng; Wei Zhang; Yun Yuan; Daojun Hong; Nicolas Charlet-Berguerand; Zhaoxia Wang; Jianwen Deng
Journal:  Proc Natl Acad Sci U S A       Date:  2022-10-03       Impact factor: 12.779

Review 2.  The polyG diseases: a new disease entity.

Authors:  Tongling Liufu; Yilei Zheng; Jiaxi Yu; Yun Yuan; Zhaoxia Wang; Jianwen Deng; Daojun Hong
Journal:  Acta Neuropathol Commun       Date:  2022-05-31       Impact factor: 7.578

Review 3.  Non-canonical DNA/RNA structures associated with the pathogenesis of Fragile X-associated tremor/ataxia syndrome and Fragile X syndrome.

Authors:  Aadil Yousuf; Nadeem Ahmed; Abrar Qurashi
Journal:  Front Genet       Date:  2022-08-30       Impact factor: 4.772

  3 in total

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