Literature DB >> 33373180

Structural and Biosynthetic Analysis of the Fabrubactins, Unusual Siderophores from Agrobacterium fabrum Strain C58.

Vladimir Vinnik1,2, Fan Zhang3, Hyunjun Park1,4, Taylor B Cook5, Kurt Throckmorton1, Brian F Pfleger5, Tim S Bugni3, Michael G Thomas1.   

Abstract

Siderophores are iron-chelating molecules produced by microorganisms and plants to acquire exogenous iron. Siderophore biosynthetic enzymology often produces elaborate and unique molecules through unusual reactions to enable specific recognition by the producing organisms. Herein, we report the structure of two siderophore analogs from Agrobacterium fabrum strain C58, which we named fabrubactin (FBN) A and FBN B. Additionally, we characterized the substrate specificities of the NRPS and PKS components. The structures suggest unique Favorskii-like rearrangements of the molecular backbone that we propose are catalyzed by the flavin-dependent monooxygenase, FbnE. FBN A and B contain a 1,1-dimethyl-3-amino-1,2,3,4-tetrahydro-7,8-dihydroxy-quinolin (Dmaq) moiety previously seen only in the anachelin cyanobacterial siderophores. We provide evidence that Dmaq is derived from l-DOPA and propose a mechanism for the formation of the mature Dmaq moiety. Our bioinformatic analyses suggest that FBN A and B and the anachelins belong to a large and diverse siderophore family widespread throughout the Rhizobium/Agrobacterium group, α-proteobacteria, and cyanobacteria.

Entities:  

Mesh:

Substances:

Year:  2020        PMID: 33373180      PMCID: PMC7882191          DOI: 10.1021/acschembio.0c00809

Source DB:  PubMed          Journal:  ACS Chem Biol        ISSN: 1554-8929            Impact factor:   5.100


  34 in total

1.  Myxoprincomide: a natural product from Myxococcus xanthus discovered by comprehensive analysis of the secondary metabolome.

Authors:  Niña Socorro Cortina; Daniel Krug; Alberto Plaza; Ole Revermann; Rolf Müller
Journal:  Angew Chem Int Ed Engl       Date:  2011-12-07       Impact factor: 15.336

2.  N-acylation during glidobactin biosynthesis by the tridomain nonribosomal peptide synthetase module GlbF.

Authors:  Heidi J Imker; Daniel Krahn; Jérôme Clerc; Markus Kaiser; Christopher T Walsh
Journal:  Chem Biol       Date:  2010-10-29

3.  Universal chemical assay for the detection and determination of siderophores.

Authors:  B Schwyn; J B Neilands
Journal:  Anal Biochem       Date:  1987-01       Impact factor: 3.365

4.  Analysis of the ambruticin and jerangolid gene clusters of Sorangium cellulosum reveals unusual mechanisms of polyketide biosynthesis.

Authors:  Bryan Julien; Zong-Qiang Tian; Ralph Reid; Christopher D Reeves
Journal:  Chem Biol       Date:  2006-12

5.  A revision of Rhizobium Frank 1889, with an emended description of the genus, and the inclusion of all species of Agrobacterium Conn 1942 and Allorhizobium undicola de Lajudie et al. 1998 as new combinations: Rhizobium radiobacter, R. rhizogenes, R. rubi, R. undicola and R. vitis.

Authors:  J M Young; L D Kuykendall; E Martínez-Romero; A Kerr; H Sawada
Journal:  Int J Syst Evol Microbiol       Date:  2001-01       Impact factor: 2.747

Review 6.  DyP-type peroxidases comprise a novel heme peroxidase family.

Authors:  Y Sugano
Journal:  Cell Mol Life Sci       Date:  2009-04       Impact factor: 9.261

7.  Structure elucidation at the nanomole scale. 1. Trisoxazole macrolides and thiazole-containing cyclic peptides from the nudibranch Hexabranchus sanguineus.

Authors:  Doralyn S Dalisay; Evan W Rogers; Arthur S Edison; Tadeusz F Molinski
Journal:  J Nat Prod       Date:  2009-04       Impact factor: 4.050

8.  Phylum-wide comparative genomics unravel the diversity of secondary metabolism in Cyanobacteria.

Authors:  Alexandra Calteau; David P Fewer; Amel Latifi; Thérèse Coursin; Thierry Laurent; Jouni Jokela; Cheryl A Kerfeld; Kaarina Sivonen; Jörn Piel; Muriel Gugger
Journal:  BMC Genomics       Date:  2014-11-18       Impact factor: 3.969

9.  Iterative screening methodology enables isolation of strains with improved properties for a FACS-based screen and increased L-DOPA production.

Authors:  Judy Savitskaya; Ryan J Protzko; Francesca-Zhoufan Li; Adam P Arkin; John E Dueber
Journal:  Sci Rep       Date:  2019-04-09       Impact factor: 4.379

10.  Flavin-mediated dual oxidation controls an enzymatic Favorskii-type rearrangement.

Authors:  Robin Teufel; Akimasa Miyanaga; Quentin Michaudel; Frederick Stull; Gordon Louie; Joseph P Noel; Phil S Baran; Bruce Palfey; Bradley S Moore
Journal:  Nature       Date:  2013-10-27       Impact factor: 49.962

View more
  1 in total

1.  Genetically engineered rpsL merodiploidy impacts secondary metabolism and antibiotic resistance in Streptomyces.

Authors:  Oksana Koshla; Maria Lopatniuk; Oksana Borys; Yuya Misaki; Volodymyr Kravets; Iryna Ostash; Anastasiia Shemediuk; Kozo Ochi; Andriy Luzhetskyy; Victor Fedorenko; Bohdan Ostash
Journal:  World J Microbiol Biotechnol       Date:  2021-03-17       Impact factor: 3.312

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.