Literature DB >> 11211278

A revision of Rhizobium Frank 1889, with an emended description of the genus, and the inclusion of all species of Agrobacterium Conn 1942 and Allorhizobium undicola de Lajudie et al. 1998 as new combinations: Rhizobium radiobacter, R. rhizogenes, R. rubi, R. undicola and R. vitis.

J M Young, L D Kuykendall, E Martínez-Romero, A Kerr, H Sawada.   

Abstract

Rhizobium, Agrobacterium and Allorhizobium are genera within the bacterial family Rhizobiaceae, together with Sinorhizobium. The species of Agrobacterium, Agrobacterium tumefaciens (syn. Agrobacterium radiobacter), Agrobacterium rhizogenes, Agrobacterium rubi and Agrobacterium vitis, together with Allorhizobium undicola, form a monophyletic group with all Rhizobium species, based on comparative 16S rDNA analyses. Agrobacterium is an artificial genus comprising plant-pathogenic species. The monophyletic nature of Agrobacterium, Allorhizobium and Rhizobium and their common phenotypic generic circumscription support their amalgamation into a single genus, Rhizobium. Agrobacterium tumefaciens was conserved as the type species of Agrobacterium, but the epithet radiobacter would take precedence as Rhizobium radiobacter in the revised genus. The proposed new combinations are Rhizobium radiobacter, Rhizobium rhizogenes, Rhizobium rubi, Rhizobium undicola and Rhizobium vitis.

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Year:  2001        PMID: 11211278     DOI: 10.1099/00207713-51-1-89

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  91 in total

Review 1.  Roses by other names: taxonomy of the Rhizobiaceae.

Authors:  William J Broughton
Journal:  J Bacteriol       Date:  2003-05       Impact factor: 3.490

2.  Discordant phylogenies within the rrn loci of Rhizobia.

Authors:  Peter van Berkum; Zewdu Terefework; Lars Paulin; Sini Suomalainen; Kristina Lindström; Bertrand D Eardly
Journal:  J Bacteriol       Date:  2003-05       Impact factor: 3.490

3.  Intense association of non-culturable endophytic bacteria with antibiotic-cleansed in vitro watermelon and their activation in degenerating cultures.

Authors:  Pious Thomas
Journal:  Plant Cell Rep       Date:  2011-10-29       Impact factor: 4.570

4.  Draft genome sequence of Rhizobium sp. strain PDO1-076, a bacterium isolated from Populus deltoides.

Authors:  Steven D Brown; Dawn M Klingeman; Tse-Yuan S Lu; Courtney M Johnson; Sagar M Utturkar; Miriam L Land; Christopher W Schadt; Mitchel J Doktycz; Dale A Pelletier
Journal:  J Bacteriol       Date:  2012-05       Impact factor: 3.490

5.  Nephromyces, a beneficial apicomplexan symbiont in marine animals.

Authors:  Mary Beth Saffo; Adam M McCoy; Christopher Rieken; Claudio H Slamovits
Journal:  Proc Natl Acad Sci U S A       Date:  2010-08-24       Impact factor: 11.205

6.  16S rRNA gene sequencing versus the API 20 NE system and the VITEK 2 ID-GNB card for identification of nonfermenting Gram-negative bacteria in the clinical laboratory.

Authors:  P P Bosshard; R Zbinden; S Abels; B Böddinghaus; M Altwegg; E C Böttger
Journal:  J Clin Microbiol       Date:  2006-04       Impact factor: 5.948

7.  Rhizobial 16S rRNA and dnaK genes: mosaicism and the uncertain phylogenetic placement of Rhizobium galegae.

Authors:  B D Eardly; S M Nour; P van Berkum; R K Selander
Journal:  Appl Environ Microbiol       Date:  2005-03       Impact factor: 4.792

8.  Nodulation of Lupinus albus by strains of Ochrobactrum lupini sp. nov.

Authors:  Martha E Trujillo; Anne Willems; Adriana Abril; Ana-María Planchuelo; Raúl Rivas; Dolores Ludeña; Pedro F Mateos; Eustoquio Martínez-Molina; Encarna Velázquez
Journal:  Appl Environ Microbiol       Date:  2005-03       Impact factor: 4.792

Review 9.  Detection of and response to signals involved in host-microbe interactions by plant-associated bacteria.

Authors:  Anja Brencic; Stephen C Winans
Journal:  Microbiol Mol Biol Rev       Date:  2005-03       Impact factor: 11.056

10.  Reconciliation of sequence data and updated annotation of the genome of Agrobacterium tumefaciens C58, and distribution of a linear chromosome in the genus Agrobacterium.

Authors:  Steven Slater; João C Setubal; Brad Goodner; Kathryn Houmiel; Jian Sun; Rajinder Kaul; Barry S Goldman; Stephen K Farrand; Nalvo Almeida; Thomas Burr; Eugene Nester; David M Rhoads; Ryosuke Kadoi; Trucian Ostheimer; Nicole Pride; Allison Sabo; Erin Henry; Erin Telepak; Lindsey Cromes; Alana Harkleroad; Louis Oliphant; Phil Pratt-Szegila; Roy Welch; Derek Wood
Journal:  Appl Environ Microbiol       Date:  2012-12-14       Impact factor: 4.792

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