Literature DB >> 3337114

An epidemiologic approach to ecogenetics.

M J Khoury1, M J Adams, W D Flanders.   

Abstract

Although "ecogenetics" seeks to examine genetically mediated differences in susceptibility to environmental agents, researchers often examine the relation between genetic markers and disease without regard to environmental determinants. By using epidemiologic definitions of genotype-environment interaction, it can be shown that the relative risk of disease for the genetic marker is a function of the frequency of exposure to the environmental agent, the strength of interaction between the genotype and the agent, and the specificity of the environmental effect vis-à-vis the genotype. Using examples from the literature, we illustrate under six patterns of genotype-environment interaction that the relative risk associated with the marker can fluctuate markedly. However, with infrequent exposures, the relative risk is close to unity (implying no genetic effect) even in the face of strong genotype-environment interaction. Alternatively, elevated relative risks imply a frequent environmental exposure or a strong pattern of interaction. We suggest that genetic marker-disease associations be evaluated within the context of an epidemiologic study design that considers specific environmental determinants of risk.

Mesh:

Year:  1988        PMID: 3337114      PMCID: PMC1715339     

Source DB:  PubMed          Journal:  Am J Hum Genet        ISSN: 0002-9297            Impact factor:   11.025


  11 in total

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Journal:  Lancet       Date:  1985-11-30       Impact factor: 79.321

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Journal:  Nature       Date:  1984 Nov 8-14       Impact factor: 49.962

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  32 in total

Review 1.  Gene-environment interactions in hypertension.

Authors:  Z Pausova; J Tremblay; P Hamet
Journal:  Curr Hypertens Rep       Date:  1999 Feb-Mar       Impact factor: 5.369

2.  The human genome project: a false dawn?. Interview by Judy Jones.

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Authors:  Paolo Boffetta; Deborah M Winn; John P Ioannidis; Duncan C Thomas; Julian Little; George Davey Smith; Vincent J Cogliano; Stephen S Hecht; Daniela Seminara; Paolo Vineis; Muin J Khoury
Journal:  Int J Epidemiol       Date:  2012-05-16       Impact factor: 7.196

4.  Method for indirectly estimating gene-environment effect modification and power given only genotype frequency and odds ratio of environmental exposure.

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Journal:  Eur J Epidemiol       Date:  2005       Impact factor: 8.082

Review 5.  Integrating epidemiology and genetic association: the challenge of gene-environment interaction.

Authors:  Peter Kraft; David Hunter
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2005-08-29       Impact factor: 6.237

6.  Invited commentary: from genome-wide association studies to gene-environment-wide interaction studies--challenges and opportunities.

Authors:  Muin J Khoury; Sholom Wacholder
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7.  Gene-environment interactions in cancer epidemiology: a National Cancer Institute Think Tank report.

Authors:  Carolyn M Hutter; Leah E Mechanic; Nilanjan Chatterjee; Peter Kraft; Elizabeth M Gillanders
Journal:  Genet Epidemiol       Date:  2013-10-05       Impact factor: 2.135

Review 8.  Hypothesis-driven candidate gene association studies: practical design and analytical considerations.

Authors:  Timothy J Jorgensen; Ingo Ruczinski; Bailey Kessing; Michael W Smith; Yin Yao Shugart; Anthony J Alberg
Journal:  Am J Epidemiol       Date:  2009-09-17       Impact factor: 4.897

9.  The genotype of the transporter associated with antigen processing gene affects susceptibility to colorectal cancer in Japanese.

Authors:  Takenori Yamauchi; Shouhei Takeuchi; Naoki Maehara; Yoshiki Kuroda
Journal:  Environ Health Prev Med       Date:  2014-05-07       Impact factor: 3.674

10.  A general test for gene-environment interaction in sib pair-based association analysis of quantitative traits.

Authors:  Sophie van der Sluis; Conor V Dolan; Michael C Neale; Danielle Posthuma
Journal:  Behav Genet       Date:  2008-04-04       Impact factor: 2.805

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