Literature DB >> 33353164

Single-Cell Transcriptional Profiling of Mouse Islets Following Short-Term Obesogenic Dietary Intervention.

Annie R Piñeros1, Hongyu Gao2, Wenting Wu1,2, Yunlong Liu2, Sarah A Tersey3, Raghavendra G Mirmira3.   

Abstract

Obesity is closely associated with adipose tissue inflammation and insulin resistance. Dysglycemia and type 2 diabetes results when islet β cells fail to maintain appropriate insulin secretion in the face of insulin resistance. To clarify the early transcriptional events leading to β-cell failure in the setting of obesity, we fed male C57BL/6J mice an obesogenic, high-fat diet (60% kcal from fat) or a control diet (10% kcal from fat) for one week, and islets from these mice (from four high-fat- and three control-fed mice) were subjected to single-cell RNA sequencing (sc-RNAseq) analysis. Islet endocrine cell types (α cells, β cells, δ cells, PP cells) and other resident cell types (macrophages, T cells) were annotated by transcript profiles and visualized using Uniform Manifold Approximation and Projection for Dimension Reduction (UMAP) plots. UMAP analysis revealed distinct cell clusters (11 for β cells, 5 for α cells, 3 for δ cells, PP cells, ductal cells, endothelial cells), emphasizing the heterogeneity of cell populations in the islet. Collectively, the clusters containing the majority of β cells showed the fewest gene expression changes, whereas clusters harboring the minority of β cells showed the most changes. We identified that distinct β-cell clusters downregulate genes associated with the endoplasmic reticulum stress response and upregulate genes associated with insulin secretion, whereas others upregulate genes that impair insulin secretion, cell proliferation, and cell survival. Moreover, all β-cell clusters negatively regulate genes associated with immune response activation. Glucagon-producing α cells exhibited patterns similar to β cells but, again, in clusters containing the minority of α cells. Our data indicate that an early transcriptional response in islets to an obesogenic diet reflects an attempt by distinct populations of β cells to augment or impair cellular function and/or reduce inflammatory responses as possible harbingers of ensuing insulin resistance.

Entities:  

Keywords:  insulin; islet; obesity; transcriptomics

Year:  2020        PMID: 33353164      PMCID: PMC7765825          DOI: 10.3390/metabo10120513

Source DB:  PubMed          Journal:  Metabolites        ISSN: 2218-1989


  42 in total

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5.  Single-Cell Transcriptomics of the Human Endocrine Pancreas.

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Journal:  Diabetes       Date:  2016-06-30       Impact factor: 9.461

6.  Pancreatic β cell dedifferentiation as a mechanism of diabetic β cell failure.

Authors:  Chutima Talchai; Shouhong Xuan; Hua V Lin; Lori Sussel; Domenico Accili
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Review 7.  Signalling danger: endoplasmic reticulum stress and the unfolded protein response in pancreatic islet inflammation.

Authors:  D L Eizirik; M Miani; A K Cardozo
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8.  Scater: pre-processing, quality control, normalization and visualization of single-cell RNA-seq data in R.

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9.  High-fat diet impacts more changes in beta-cell compared to alpha-cell transcriptome.

Authors:  Rodolphe Dusaulcy; Sandra Handgraaf; Florian Visentin; Cedric Howald; Emmanouil T Dermitzakis; Jacques Philippe; Yvan Gosmain
Journal:  PLoS One       Date:  2019-03-08       Impact factor: 3.240

10.  Clock Gene Dysregulation Induced by Chronic ER Stress Disrupts β-cell Function.

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Journal:  EBioMedicine       Date:  2017-03-30       Impact factor: 8.143

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Review 4.  It's What and When You Eat: An Overview of Transcriptional and Epigenetic Responses to Dietary Perturbations in Pancreatic Islets.

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  4 in total

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