Literature DB >> 33339832

Assessment of skin barrier function using skin images with topological data analysis.

Keita Koseki1,2,3, Hiroshi Kawasaki1,2,4, Toru Atsugi5, Miki Nakanishi5, Makoto Mizuno5, Eiji Naru5, Tamotsu Ebihara2, Masayuki Amagai2,4, Eiryo Kawakami6,7,8.   

Abstract

Recent developments of molecular biology have revealed diverse mechanisms of skin diseases, and precision medicine considering these mechanisms requires the frequent objective evaluation of skin phenotypes. Transepidermal water loss (TEWL) is commonly used for evaluating skin barrier function; however, direct measurement of TEWL is time-consuming and is not convenient for daily clinical practice. Here, we propose a new skin barrier assessment method using skin images with topological data analysis (TDA). TDA enabled efficient identification of structural features from a skin image taken by a microscope. These features reflected the regularity of the skin texture. We found a significant correlation between the topological features and TEWL. Moreover, using the features as input, we trained machine-learning models to predict TEWL and obtained good accuracy (R2 = 0.524). Our results suggest that assessment of skin barrier function by topological image analysis is promising.

Entities:  

Year:  2020        PMID: 33339832     DOI: 10.1038/s41540-020-00160-8

Source DB:  PubMed          Journal:  NPJ Syst Biol Appl        ISSN: 2056-7189


  21 in total

Review 1.  Epidermal barrier dysfunction and cutaneous sensitization in atopic diseases.

Authors:  Akiharu Kubo; Keisuke Nagao; Masayuki Amagai
Journal:  J Clin Invest       Date:  2012-02-01       Impact factor: 14.808

Review 2.  Epidermal barrier formation and recovery in skin disorders.

Authors:  Julia A Segre
Journal:  J Clin Invest       Date:  2006-05       Impact factor: 14.808

3.  Topology of viral evolution.

Authors:  Joseph Minhow Chan; Gunnar Carlsson; Raul Rabadan
Journal:  Proc Natl Acad Sci U S A       Date:  2013-10-29       Impact factor: 11.205

4.  Hierarchical structures of amorphous solids characterized by persistent homology.

Authors:  Yasuaki Hiraoka; Takenobu Nakamura; Akihiko Hirata; Emerson G Escolar; Kaname Matsue; Yasumasa Nishiura
Journal:  Proc Natl Acad Sci U S A       Date:  2016-06-13       Impact factor: 11.205

5.  Transepidermal water loss in healthy adults: a systematic review and meta-analysis update.

Authors:  M Akdeniz; S Gabriel; A Lichterfeld-Kottner; U Blume-Peytavi; J Kottner
Journal:  Br J Dermatol       Date:  2018-09-09       Impact factor: 9.302

Review 6.  The multifunctional role of filaggrin in allergic skin disease.

Authors:  Maeve A McAleer; Alan D Irvine
Journal:  J Allergy Clin Immunol       Date:  2013-02       Impact factor: 10.793

Review 7.  Epithelial barrier repair and prevention of allergy.

Authors:  Elena Goleva; Evgeny Berdyshev; Donald Ym Leung
Journal:  J Clin Invest       Date:  2019-02-18       Impact factor: 14.808

8.  Skin barrier impairment at birth predicts food allergy at 2 years of age.

Authors:  Maeve M Kelleher; Audrey Dunn-Galvin; Claire Gray; Deirdre M Murray; Mairead Kiely; Louise Kenny; W H Irwin McLean; Alan D Irvine; Jonathan O'B Hourihane
Journal:  J Allergy Clin Immunol       Date:  2016-04       Impact factor: 10.793

9.  Skin barrier dysfunction measured by transepidermal water loss at 2 days and 2 months predates and predicts atopic dermatitis at 1 year.

Authors:  Maeve Kelleher; Audrey Dunn-Galvin; Jonathan O'B Hourihane; Deirdre Murray; Linda E Campbell; W H Irwin McLean; Alan D Irvine
Journal:  J Allergy Clin Immunol       Date:  2015-01-22       Impact factor: 10.793

10.  Common loss-of-function variants of the epidermal barrier protein filaggrin are a major predisposing factor for atopic dermatitis.

Authors:  Colin N A Palmer; Alan D Irvine; Ana Terron-Kwiatkowski; Yiwei Zhao; Haihui Liao; Simon P Lee; David R Goudie; Aileen Sandilands; Linda E Campbell; Frances J D Smith; Gráinne M O'Regan; Rosemarie M Watson; Jo E Cecil; Sherri J Bale; John G Compton; John J DiGiovanna; Philip Fleckman; Sue Lewis-Jones; Gehan Arseculeratne; Ann Sergeant; Colin S Munro; Brahim El Houate; Ken McElreavey; Liselotte B Halkjaer; Hans Bisgaard; Somnath Mukhopadhyay; W H Irwin McLean
Journal:  Nat Genet       Date:  2006-03-19       Impact factor: 38.330

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