Literature DB >> 33336253

Disseminated Mycobacterium marinum in Human Immunodeficiency Virus Unmasked by Immune Reconstitution Inflammatory Syndrome.

Maura Manion1, Augusto Dulanto Chiang1, Luxin Pei1, Chun-Shu Wong1, Pavel Khil1,2, Dima A Hammoud3, Megan Anderson1, Elizabeth Laidlaw1, Safia Kuriakose4, Andrea Lisco1, Adrian M Zelazny5, John P Dekker1, Irini Sereti1.   

Abstract

Distinguishing disseminated Mycobacterium marinum from multifocal cutaneous disease in persons with human immunodeficiency virus/AIDS can present a diagnostic challenge, especially in the context of immune reconstitution inflammatory syndrome (IRIS). In this work, we demonstrate the utility of flow cytometry and whole genome sequencing (WGS) to diagnose disseminated M. marinum unmasked by IRIS following initiation of antiretroviral therapy. Flow cytometry demonstrated robust cytokine production by CD4 T cells in response to stimulation with M. marinum lysate. WGS of isolates from distinct lesions was consistent with clonal dissemination, supporting that preexisting disseminated M. marinum disease was uncovered by inflammatory manifestations, consistent with unmasking mycobacterial IRIS. Published by Oxford University Press for the Infectious Diseases Society of America 2020.

Entities:  

Keywords:  zzm321990 Mycobacterium marinumzzm321990 ; HIV; IRIS; whole genome sequencing

Mesh:

Year:  2021        PMID: 33336253      PMCID: PMC8328204          DOI: 10.1093/infdis/jiaa769

Source DB:  PubMed          Journal:  J Infect Dis        ISSN: 0022-1899            Impact factor:   5.226


  14 in total

1.  Exacerbation of skin mycobacterial lesions under highly active antiretroviral therapy in an HIV-infected patient.

Authors:  A Sotto; B Guillot; M Dandurand; J Jourdan
Journal:  AIDS       Date:  1999-09-10       Impact factor: 4.177

2.  Assembling single-cell genomes and mini-metagenomes from chimeric MDA products.

Authors:  Sergey Nurk; Anton Bankevich; Dmitry Antipov; Alexey A Gurevich; Anton Korobeynikov; Alla Lapidus; Andrey D Prjibelski; Alexey Pyshkin; Alexander Sirotkin; Yakov Sirotkin; Ramunas Stepanauskas; Scott R Clingenpeel; Tanja Woyke; Jeffrey S McLean; Roger Lasken; Glenn Tesler; Max A Alekseyev; Pavel A Pevzner
Journal:  J Comput Biol       Date:  2013-10       Impact factor: 1.479

3.  Prokka: rapid prokaryotic genome annotation.

Authors:  Torsten Seemann
Journal:  Bioinformatics       Date:  2014-03-18       Impact factor: 6.937

4.  Selective expansion of polyfunctional pathogen-specific CD4(+) T cells in HIV-1-infected patients with immune reconstitution inflammatory syndrome.

Authors:  Yolanda D Mahnke; Jamieson H Greenwald; Rebecca DerSimonian; Gregg Roby; Lis R V Antonelli; Alan Sher; Mario Roederer; Irini Sereti
Journal:  Blood       Date:  2012-01-04       Impact factor: 22.113

5.  Polymerase chain reaction of secA1 on sputum or oral wash samples for the diagnosis of pulmonary tuberculosis.

Authors:  J Lucian Davis; Laurence Huang; Joseph A Kovacs; Henry Masur; Patrick Murray; Diane V Havlir; William O Worodria; Edwin D Charlebois; Padmini Srikantiah; Adithya Cattamanchi; Charles Huber; Yvonne R Shea; Yuenwah Chow; Steven H Fischer
Journal:  Clin Infect Dis       Date:  2009-03-15       Impact factor: 9.079

6.  Identification of mutations in laboratory-evolved microbes from next-generation sequencing data using breseq.

Authors:  Daniel E Deatherage; Jeffrey E Barrick
Journal:  Methods Mol Biol       Date:  2014

7.  Circlator: automated circularization of genome assemblies using long sequencing reads.

Authors:  Martin Hunt; Nishadi De Silva; Thomas D Otto; Julian Parkhill; Jacqueline A Keane; Simon R Harris
Journal:  Genome Biol       Date:  2015-12-29       Impact factor: 13.583

8.  Mash: fast genome and metagenome distance estimation using MinHash.

Authors:  Brian D Ondov; Todd J Treangen; Páll Melsted; Adam B Mallonee; Nicholas H Bergman; Sergey Koren; Adam M Phillippy
Journal:  Genome Biol       Date:  2016-06-20       Impact factor: 13.583

9.  Canu: scalable and accurate long-read assembly via adaptive k-mer weighting and repeat separation.

Authors:  Sergey Koren; Brian P Walenz; Konstantin Berlin; Jason R Miller; Nicholas H Bergman; Adam M Phillippy
Journal:  Genome Res       Date:  2017-03-15       Impact factor: 9.043

10.  Invasive Mycobacterium marinum infections.

Authors:  Timothy Lahey
Journal:  Emerg Infect Dis       Date:  2003-11       Impact factor: 6.883

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  1 in total

1.  Double trouble: Concomitant unmasking and paradoxical immune reconstitution inflammatory syndrome in a patient with newly diagnosed HIV.

Authors:  Jennifer Makhoul; Surabhi Uppal; Marc Siegel
Journal:  IDCases       Date:  2022-03-25
  1 in total

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