Literature DB >> 33326086

In Vivo Functional Analysis of Nonconserved Human lncRNAs Using a Humanized Mouse Model.

Yonghe Ma1, Cheng-Fei Jiang1, Ping Li1, Haiming Cao2.   

Abstract

LncRNAs (long noncoding RNAs) are transcripts that are at least 200 nucleotides long and lack any predicted coding potential. Whereas significant progress has been made in deciphering the function of mouse lncRNAs, critical gaps remain in understanding how human lncRNAs exercise their function in a physiological context. As most human lncRNAs are currently considered nonconserved and often do not have homologs in mouse, the technical bottleneck is the lack of a suitable model to study the physiological function. Chimeric mice with repopulated human hepatocytes have emerged as promising tools to study human-specific, liver enriched lncRNAs. Among all liver-specific humanized mouse models, TK-NOG is relatively easy to prepare and holds a higher repopulation rate for a prolonged period of time. In this chapter, we will illustrate how to establish humanized TK-NOG mice for in vivo analysis of human lncRNAs in detail.

Entities:  

Keywords:  Humanized mice; Liver; Nonconserved; Repopulation; TK-NOG; lncRNA

Year:  2021        PMID: 33326086     DOI: 10.1007/978-1-0716-1158-6_21

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  14 in total

1.  A Long Non-coding RNA, lncLGR, Regulates Hepatic Glucokinase Expression and Glycogen Storage during Fasting.

Authors:  Xiangbo Ruan; Ping Li; Andrew Cangelosi; Ling Yang; Haiming Cao
Journal:  Cell Rep       Date:  2016-02-18       Impact factor: 9.423

Review 2.  Long noncoding RNAs in cell biology.

Authors:  Michael B Clark; John S Mattick
Journal:  Semin Cell Dev Biol       Date:  2011-01-20       Impact factor: 7.727

Review 3.  The functions and unique features of long intergenic non-coding RNA.

Authors:  Julia D Ransohoff; Yuning Wei; Paul A Khavari
Journal:  Nat Rev Mol Cell Biol       Date:  2017-11-15       Impact factor: 94.444

4.  Integrative Transcriptome Analyses of Metabolic Responses in Mice Define Pivotal LncRNA Metabolic Regulators.

Authors:  Ling Yang; Ping Li; Wenjing Yang; Xiangbo Ruan; Kurtis Kiesewetter; Jun Zhu; Haiming Cao
Journal:  Cell Metab       Date:  2016-09-22       Impact factor: 27.287

Review 5.  Long noncoding RNAs: cellular address codes in development and disease.

Authors:  Pedro J Batista; Howard Y Chang
Journal:  Cell       Date:  2013-03-14       Impact factor: 41.582

6.  Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals.

Authors:  Mitchell Guttman; Ido Amit; Manuel Garber; Courtney French; Michael F Lin; David Feldser; Maite Huarte; Or Zuk; Bryce W Carey; John P Cassady; Moran N Cabili; Rudolf Jaenisch; Tarjei S Mikkelsen; Tyler Jacks; Nir Hacohen; Bradley E Bernstein; Manolis Kellis; Aviv Regev; John L Rinn; Eric S Lander
Journal:  Nature       Date:  2009-02-01       Impact factor: 49.962

Review 7.  Humanized Mouse Models of Clinical Disease.

Authors:  Nicole C Walsh; Laurie L Kenney; Sonal Jangalwe; Ken-Edwin Aryee; Dale L Greiner; Michael A Brehm; Leonard D Shultz
Journal:  Annu Rev Pathol       Date:  2016-12-05       Impact factor: 23.472

8.  The evolution of lncRNA repertoires and expression patterns in tetrapods.

Authors:  Anamaria Necsulea; Magali Soumillon; Maria Warnefors; Angélica Liechti; Tasman Daish; Ulrich Zeller; Julie C Baker; Frank Grützner; Henrik Kaessmann
Journal:  Nature       Date:  2014-01-19       Impact factor: 49.962

9.  Feedback modulation of cholesterol metabolism by the lipid-responsive non-coding RNA LeXis.

Authors:  Tamer Sallam; Marius C Jones; Thomas Gilliland; Li Zhang; Xiaohui Wu; Ascia Eskin; Jaspreet Sandhu; David Casero; Thomas Q de Aguiar Vallim; Cynthia Hong; Melanie Katz; Richard Lee; Julian Whitelegge; Peter Tontonoz
Journal:  Nature       Date:  2016-05-11       Impact factor: 49.962

10.  Mice with chimeric livers are an improved model for human lipoprotein metabolism.

Authors:  Ewa C S Ellis; Willscott Edward Naugler; Scott Nauglers; Paolo Parini; Lisa-Mari Mörk; Carl Jorns; Helen Zemack; Anita Lövgren Sandblom; Ingemar Björkhem; Bo-Göran Ericzon; Elizabeth M Wilson; Stephen C Strom; Markus Grompe
Journal:  PLoS One       Date:  2013-11-04       Impact factor: 3.240

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  1 in total

1.  Lnc-EST12, which is negatively regulated by mycobacterial EST12, suppresses antimycobacterial innate immunity through its interaction with FUBP3.

Authors:  Qili Yao; Yan Xie; Dandan Xu; Zilu Qu; Jian Wu; Yuanyuan Zhou; Yuying Wei; Huan Xiong; Xiao-Lian Zhang
Journal:  Cell Mol Immunol       Date:  2022-05-30       Impact factor: 22.096

  1 in total

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