| Literature DB >> 33319126 |
Rahul Pannala1, Kumar Krishnan2, Joshua Melson3, Mansour A Parsi4, Allison R Schulman5, Shelby Sullivan6, Guru Trikudanathan7, Arvind J Trindade8, Rabindra R Watson9, John T Maple10, David R Lichtenstein11.
Abstract
BACKGROUND AND AIMS: Artificial intelligence (AI)-based applications have transformed several industries and are widely used in various consumer products and services. In medicine, AI is primarily being used for image classification and natural language processing and has great potential to affect image-based specialties such as radiology, pathology, and gastroenterology (GE). This document reviews the reported applications of AI in GE, focusing on endoscopic image analysis.Entities:
Keywords: ADR, adenoma detection rate; AI, artificial intelligence; AMR, adenoma miss rate; ANN, artificial neural network; BE, Barrett’s esophagus; CAD, computer-aided diagnosis; CADe, CAD studies for colon polyp detection; CADx, CAD studies for colon polyp classification; CI, confidence interval; CNN, convolutional neural network; CRC, colorectal cancer; DL, deep learning; GI, gastroenterology; HD-WLE, high-definition white light endoscopy; HDWL, high-definition white light; ML, machine learning; NBI, narrow-band imaging; NPV, negative predictive value; PIVI, preservation and Incorporation of Valuable Endoscopic Innovations; SVM, support vector machine; VLE, volumetric laser endomicroscopy; WCE, wireless capsule endoscopy; WL, white light
Year: 2020 PMID: 33319126 PMCID: PMC7732722 DOI: 10.1016/j.vgie.2020.08.013
Source DB: PubMed Journal: VideoGIE ISSN: 2468-4481
Figure 1Diagram representation of hierarchy of artificial intelligence domains (adapted from Goodfellow et al with permission). Abbreviations: AI, artificial intelligence; ML, machine learning; RL, representation learning; DL, deep learning.
Figure 2Flowchart and descriptions of various types of learning and differentiation between conventional machine learning and deep learning (adapted from Chartrand et al with permission).
Figure 3An example of convolutional neural network for colorectal polyps (adapted from Byrne et al with permission).
Glossary of common artificial intelligence-related terms and definitions,,,
| Term | Definition/Description |
|---|---|
| Artificial intelligence (AI) | Branch of computer science that develops machines to perform tasks that would usually require human intelligence |
| Machine learning (ML) | Subfield of AI in which algorithms are trained to perform tasks by learning patterns from data rather than by explicit programming |
| Representation learning (RL) | Subtype of ML in which algorithms learn the best features required to classify data on their own |
| Deep learning (DL) | Type of RL in which algorithms learn a composition of features that reflect a hierarchy of structures in the data and provide detailed image classification output |
| Deep reinforcement learning (DRL) | Technique combining DL and sequential learning to achieve a specific goal over several steps in a dynamic environment |
| Training dataset | Dataset used to select the ideal parameters of a model after iterative adjustments |
| Validation dataset | A (usually) distinct dataset used to test and adjust the parameters of a model |
| Neural networks | Model of layers consisting of connected nodes broadly similar to neurons in a biological nervous system |
| Support vector machine (SVM) | Classification technique that enables identification of an optimal separation plane between categories by receiving data inputs in a testing dataset and providing outputs that can be used in a separate validation dataset |
| Recurrent neural networks | DL architecture for tasks involving sequential inputs such as speech or language and used for speech recognition and natural language processing and understanding (eg, predictive text suggestions for next words in a sequence) |
| Convolutional neural networks (CNN) | DL architecture that adaptively learns hierarchies of features through back-propagation and is used for detection and recognition tasks in images (eg, face recognition) |
| Computer-aided detection/diagnosis | Use of a computer algorithm to provide detection or a diagnosis of a specified object/region of interest |
| Transfer learning | Ability of a trained CNN model to perform a separate task by using a relatively small dataset for the new task |
Reported applications of computer-aided diagnosis and artificial intelligence in various endoscopic procedures
| Procedure | Application |
|---|---|
| Detection of polyps (real time and on still images and video) | |
| Classification of polyps (neoplastic vs hyperplastic) | |
| Detection of malignancy within polyps (depth of invasion on endocytoscopic images) | |
| Presence of inflammation on endocytoscopic images | |
| Lesion detection and classification (bleeding, ulcers, polyps) | |
| Assessment of intestinal motility | |
| Celiac disease (assessment of villous atrophy, intestinal motility) | |
| Improve efficiency of image review | |
| Deletion of duplicate images and uninformative image frames (eg, images with debris) | |
| Identify anatomical location | |
| Diagnosis of | |
| Gastric cancer detection and assessing depth of invasion | |
| Esophageal squamous dysplasia | |
| Detection and delineation of early dysplasia in Barrett’s esophagus | |
| Real-time image segmentation in volumetric laser endomicroscopy (VLE) in Barrett’s esophagus | |
| Differentiation of pancreatic cancer from chronic pancreatitis and normal pancreas | |
| Differentiation of autoimmune pancreatitis from chronic pancreatitis | |
| EUS elastography |
Applications in which use of deep learning has been reported.
Summary of reported studies on computer-aided diagnosis or detection of colorectal polyps
| Study | Design | Real time or delayed? | Lesion number (learning/validation) | Type of computer aided design | Imaging technology | Lesion size and type | Sensitivity/Specificity/Negative predictive value accuracy for neoplasia | Accuracy for surveillance interval |
|---|---|---|---|---|---|---|---|---|
| Takemura 2010 | Retrospective | Image analysis ex vivo. Not real time capable. | 72 polyps/134 polyps | Automated classification | Magnifying chromoendoscopy (Kudo pit pattern) | NR | NR/NR/NR/98.5% | NS |
| No SA | ||||||||
| Tischendorf 2010 | Post hoc analysis of prospective data | Image analysis ex vivo. Not real time capable. | 209 polyps/NS | Automated classification with SVM | Magnifying NBI | 8.1 mm avg (2-40 mm) | 90%/70%/NR | NS |
| SA excluded | 85.3% | |||||||
| Gross 2011 | Post hoc analysis of prospective data | Image analysis ex vivo. Not real time capable. | 434 polyps/NS | Automated classification with SVM | Magnifying NBI | 2-10 mm (SA; n = 2) | 95%/90.3/NR/93.1% | NS |
| Takemura 2012 | Retrospective | Image analysis ex vivo | NR/371 polyps | Automated classification with SVM | Magnifying NBI | NR | 97.8%/97.9%/NR/97.8% | NS |
| No SA | ||||||||
| Kominami 2016 | Prospective | Real time analysis of ex vivo images | NR/118 polyps | Automated classification with SVM | Magnifying NBI | ≤5 mm: 88 | For ≤5 mm:93%/93.3%/93%/93.2% | 92.7% |
| SA excluded | ||||||||
| Chen 2018 | Prospective validation | Image analysis ex vivo. | 2157/284 polyps | Automated classification with CNN | Magnifying NBI | SA excluded | 96.3%/78.1%/91.5%/90.1% | NS |
| Real time capability. | ||||||||
| Byrne 2019 | Prospective validation | Ex vivo video images. Real time capability (50 ms delay) | Test set: 125 videos | Automated classification with CNN | Near focus NBI | SA excluded | 98%/83%/97% | NS |
| 94% | ||||||||
| Jin 2020 | Prospective validation | Image analysis ex vivo | 2150/300 | Automated classification with CNN | NBI | ≤5 mm:300 | 83.3%/91.7%/NR/86.7% | NS |
| SA excluded | ||||||||
| Mori 2015 | Retrospective | Ex vivo of still images | NR/176 polyps | Automated classification (type NS) | Endocytoscopy | ≤10 mm:176 | 92%/79.5%/NR/89.2% | NR |
| SA excluded | ||||||||
| Mori 2016 | Retrospective | Ex vivo of still images. Real time capability. | 6051/205 polyps | Automated classification with SVM | Endocytoscopy | ≤5 mm: 139 | 89%/88%/76%/89% | 96% |
| 6-10 mm: 66 | ||||||||
| No SA | ||||||||
| Misawa 2016 | Prospective | Ex vivo of still images | 979/100 | Automated classification with SVM | Endocytoscopy with NBI | Mean 8.6 ± 10.3 mm | 84.5%/97.6%/82%/90% | NR |
| No SA | ||||||||
| Mori 2018 | Prospective | Real time colonoscopy | NS/475 polyps | Automated classification with SVM | Endocytoscopy with NBI and MB | ≤5 mm: 475 | Rectosigmoid: NR/NR/96.4%/98.1% | NR |
| No SA |
Abbreviations: CNN, convolutional neural network; MB, methylene blue; NBI, narrow-band imaging (Olympus Corporation, Center Valley, Penn, USA); NR, not reported; NS, not specified or studied; SA, serrated adenoma (includes SSA and traditional SA); SVM, support vector machine.