| Literature DB >> 33306060 |
Paul M Peterson1, Steven P Sylvester2, Konstantin Romaschenko1, Robert J Soreng1, Patricia Barberá3, Alejandro Quintanar4, Carlos Aedo5.
Abstract
Based on a molecular DNA phylogeny of three plastid (rpl32-trnK, rps16 intron, and rps16-trnK) and nuclear ITS regions investigating 32 species of Agrostidinae, we describe two new genera, Agrostula gen. nov. with a single species and Alpagrostis gen. nov. with four species; provide support for five species in a monophyletic Podagrostis; and include a small sample of 12 species of a monophyletic Agrostis s.s. (including the type and most species of Neoschischkinia), that separates into two clades corresponding to A. subg. Agrostis and A. subg. Vilfa. Agrostula differs from Agrostis in having leaf blades with pillars of sclerenchyma which are continuous between the adaxial and abaxial surface of the blades, dorsally rounded glumes with blunt to truncate and erose to denticulate apices, florets ½ the length of the glumes, lemmas equally wide as long, widest at (or near) apex, apices broadly truncate, irregularly 5 to 7 denticulate to erose, awnless, anthers longer than the lemmas, and rugose-papillose caryopses. Alpagrostis differs from Agrostis in having geniculate basally inserted awns and truncate lemma apices with lateral veins prolonged from the apex in (2)4 setae. The following eight new combinations are made: Agrostula truncatula, Agrostula truncatula subsp. durieui, Alpagrostis alpina, Alpagrostis alpina var. flavescens, Alpagrostis barceloi, Alpagrostis setacea, Alpagrostis setacea var. flava, and Alpagrostis schleicheri. In addition, we provide a key separating Agrostula and Alpagrostis from Agrostis s.s. and other genera previously considered as synonyms of Agrostis; lectotypify Agrostis alpina Scop., A. schleicheri Jord. & Verl., A. truncatula Parl., and A. truncatula var. durieui Henriq.; and neotypify A. setacea Curtis.Entities:
Keywords: Agrostis ; Agrostula ; Alpagrostis ; Neoschischkinia ; Podagrostis ; ITS; classification; phylogeny; plastid DNA sequences; taxonomy
Year: 2020 PMID: 33306060 PMCID: PMC7695677 DOI: 10.3897/phytokeys.167.55171
Source DB: PubMed Journal: PhytoKeys ISSN: 1314-2003 Impact factor: 1.635
Taxon voucher (collector, number, and where the specimen is housed), country of origin, and GenBank accession for DNA sequences of rps16-trnK, rps16 intron, rpl32-trnL, and ITS regions; a dash (–) indicates missing data.
| Taxa | Voucher | Country | rps16-trnK | rps16 intron | rpl32-trnL |
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| 1 | Soreng 7484, Gillespie & Peterson ( | Austria, Niederosterrich |
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| 2 | Evans 145, Lellinger & Bowers ( | Costa Rica, San Jose |
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| 3 | Soreng 8967b & Cabi ( | Turkey, Erzurum |
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| 4 | Herrero 1874, Aedo, Aizpuru, Alarcón, Aldasoro, Castroviejo, Conti, Estébanez, Güemes, Guillén, Navarro, Pedrol, Prunell, Rico, Rodríguez Gracia & Tinti ( | Italy, Abruzzo |
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| 5 | Aedo 19209 ( | France, Landes |
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| 6 | Gil s.n. ( | Spain, Coruña |
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| 7 | Louzan s.n. & Rodríguez-Oubiña ( | Spain, Coruña |
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| 8 | Smith 1288 ( | Sweden, Härjedalen |
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| 9 | Tibet-MacArthur 1516, Wen, Nie, Soreng, Rankin, Yue, Wang & Yue ( | China, Yunnan |
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| 10 | Serra 8114 ( | Spain |
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| 11 | Soreng 5276, Peterson & Sun Hang ( | China, Yunnan |
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| 12 | Carrera s.n. ( | Spain |
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| 13 | Escobar-García s.n. ( | Spain |
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| 14 | Peterson 19053 & Sánchez Alvarado ( | Mexico, Durango |
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| 15 | Arán 5627, Patino & Valencia ( | Spain, Cantabria |
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| 16 | Lathrop 5571 ( | Costa Rica |
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| 17 | Peterson 24374, Soreng & Romaschenko ( | Tanzania, Kilimanjaro |
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| 18 | Barberá 916 ( | Spain |
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| 19 | García Río ( | Spain, Ciudad Real |
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| 20 | Morales 2470 ( | Spain |
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| 21 | Barta 1999-14 ( | Austria, Niederösterreich |
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| 22 | Howell 23214 ( | USA |
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| 23 | Calvo 4970 ( | Czech Republic, South Bohemian |
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| 24 | Tibet-MacArthur 1317 ( | China |
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| 25 | Soreng 7637, Johnson, Shuvalov, Chapurin, Samsaliev & Samsaliev ( | Kyrgyzstan, Naryn |
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| 26 | Cabezas 688, Aedo, Calvo, Castroviejo, Constantidinis, Gonzalo, Güemes, Herrero, Karidas, Medina, Navarro, Pedrol, Prunell, Quintanar, Rico & Rodríguez Gracia ( | Greece, Epiro |
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| 27 | Soreng 7722, Johnson, Shuvalov, Chapurin, Samsaliev & Samsaliev ( | Kyrgyzstan, Chu |
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| 28 | Butzke 11180 ( | Brazil | – | – |
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| 29 | Wasum 1178 ( | Brazil, Rio Grande do Sul | – | – |
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| 30 | Hale 20420 & Soderstrom ( | Mexico, Chiapas |
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| 31 | Craven 672 (NSW) | Australia, New South Wales |
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| 32 | Thomas 9650 ( | USA |
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| 33 | Chase A. 5727 ( | USA |
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| 34 | Gander 8198 ( | USA |
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| 35 | Wood 14625 ( | USA Hawaii, Kaua`i |
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| 36 | Eastham 10895 ( | Canada, British Columbia | – | – |
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| 37 | Spellenberg 1574 & Spellenberg ( | Canada, Alberni-Clayoquot | – | – |
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| 38 | Harrison 10038 ( | USA, Utah | – | – |
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| 39 | Nielsen 6612 ( | USA, Utah | – | – |
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| 40 | Crampton 3860 ( | USA, California | – | – | – |
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| 41 | Davis 2949 ( | USA, Idaho |
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| 42 | Peterson 19755, Saarela & Sears ( | USA, California |
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| 43 | Soreng 7419 & Soreng ( | USA, California |
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| 44 | Terrell 4204 ( | USA, California |
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| 45 | Aedo 12786 ( | Spain, Murcia |
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| 46 | López Jiménez 1241 & García Tapia ( | Morocco, Nador |
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| 47 | Rivas Martínez, Costa & Regueiro ( | Spain, Islas Baleares |
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| 48 | Sanz Fábregas s.n. ( | Spain, Almeria |
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Characteristics of rps16-trnK, rps16 intron, rpl32-trnL, and ITS, and parameters used in Bayesian analyses indicated by Akaike Information Criterion (AIC).
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| Total aligned characters | 738 | 845 | 904 | 2487 | 712 | 3199 |
| Number of sequences | 41 | 40 | 47 | 128 | 48 | 176 |
| Likelihood score (-ln | 1259.16 | 1449.21 | 1888.70 | 1989.55 | ||
| Number of substitution types | 6 | 6 | 6 | – | 6 | – |
| Model for among-sites rate variation | gamma | gamma | gamma | – | gamma | – |
| Substitution rates | ||||||
| rAC | 2.44683 | 2.33760 | 1.03926 | – | 0.78611 | – |
| rAG | 2.12801 | 1.84060 | 0.64852 | 2.03233 | ||
| rAT | 0.11415 | 0.31850 | 0.20833 | 1.27811 | ||
| rCG | 1.41016 | 0.78529 | 0.73967 | 0.31482 | ||
| rCT | 2.47892 | 2.54521 | 0.97480 | 5.07499 | ||
| rGT | 1.00000 | 1.00000 | 1.00000 | 1.00000 | ||
| Character state frequencies | ||||||
| fA | 0.28602 | 0.35597 | 0.36767 | – | 0.22141 | – |
| fC | 0.16385 | 0.15120 | 0.14893 | 0.29792 | ||
| fG | 0.16537 | 0.18750 | 0.13618 | 0.29123 | ||
| fT | 0.38477 | 0.30534 | 0.34722 | 0.18944 | ||
| Proportion of invariable sites | 0.37013 | 0.1041 | 0.36504 | – | 0.30563 | – |
| Substitution model | TVM+G | GTR+I+G | GTR+G | – | GTR+I+G | – |
| Gamma shape parameter (α) | 0.90138 | 0.45913 | 0.83500 | – | 0.38018 | – |
Figure 1.Maximum-likelihood tree inferred from combined plastid (rpl32-trnL, rps16 intron, rps16-trnK) and ITS sequences. Numbers above the branches are posterior probabilities; numbers below the branches are bootstrap values; accessions marked with an asterisk* were formerly included in ; and letters refer to clade A = and clade B = . Scale bar: 0.002 substitutions per site.
Figure 2.A, D spikelets B caryopsis C floret E floret, showing dorsal surface. Plant fragments taken from Sain-Lager 3 (US-1628154).
| 1 | Spikelets disarticulating below the glumes, the glumes, floret, and part of the pedicel falling together as a unit; glume apices lanceolate or lanceolate-subulate, muticous, mucronate or awned; palea < ½ the length of the lemma |
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| – | Spikelets disarticulating above the glumes, the glumes remaining on the inflorescence after the florets have fallen; glumes acute to acuminate, not awned; palea of varying length, absent or rudimentary to equaling the length of the lemma |
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| 2 | Rachilla extension present (cases where it is sometimes rudimentary key both ways), of varying lengths (sometimes very short, and requiring the base of the palea checked closely to distinguish the structure from hairs), glabrous or pilulose to densely pilose; palea well-developed, generally > 2/3 the length of the lemma |
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| – | Rachilla extension absent; palea of varying length |
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| 3 | Lemmas densely pubescent, with rigid and abundant hairs; callus and rachilla notably hairy; lemmas with a well-developed usually geniculate and twisted awn, > 1 mm long, inserted in the lower or upper half of the lemma, clearly exceeding the glumes; taxa from southern Hemisphere (Australia, Malaysia, New Zealand, South Africa and South America) |
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| – | Lemmas glabrous; callus and rachilla glabrous or with short hairs emerging from only the rachilla apex and the basal side-ridges of the callus; lemmas unawned or with a short straight awn, usually < 0.5 mm long, inserted in the upper half of the lemma, not or barely exceeding the glumes (awn well-developed, 1.6–2 mm long, inserted in lower 1/3 of lemma, straight or geniculate and usually not surpassing glumes in |
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| 4 | Lemma apex terminating in 2 or 4 scabrous setae 0.1–2 mm long; lemma with a well-developed geniculate and twisted awn inserted basally or in the lower 1/3 and surpassing the glumes; paleas < 1/3 the length of the lemma; calluses pilulose or densely tufted; leaf blades often filiform or involute; lemma surfaces pilose ( |
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| – | Lemma apex entire or finely dentate with short teeth at the end of each lateral vein; lemmas muticous, with a straight mucron 0.2–1 mm long, or with a long geniculate and twisted awn to 6+ mm long, inserted in the lower, middle or upper 1/3 of the lemma but usually not basally, not surpassing to greatly surpassing the glumes; lemma surface usually glabrous (sometimes pilose e.g. |
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| 5 | Anthers 0.2–0.7 mm long; lemma surface often pilose; awn inserted in the lower 1/3 but usually not basally; longest setae of lemma apex 0.4–2 mm long; caryopsis thin or with liquid endosperm; leaf blades filiform or flat, generally 1–4 mm diam.; annuals from southern South America |
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| – | Anthers 0.7–2.3 mm long; lemma surface usually glabrous or pilulose basally; longest setae of lemma apex 0.1–0.5 mm long; awn inserted basally; leaf blades filiform or involute, 0.1–1.5 mm diam. as folded or rolled; perennials of Europe and NW Africa |
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| 6 | Floret equaling or subequaling the glumes, sometimes slightly shorter but reaching past ¾ the length of the glumes, usually with a short rachilla prolongation emerging behind the palea (sometimes absent in many florets of |
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| – | Floret notably shorter than the glumes, usually 1/3–3/4 the length of the glumes, rarely longer, without a trace of a rachilla prolongation; paleas well-developed, poorly-developed, or absent, when well-developed reaching from ½–¾ the length of the lemma; lemmas muticous, with a short straight awn 0.2–1 mm long, or with a long geniculate and twisted awn to 6+ mm long, inserted basally, medially or in the upper half of the lemma, not surpassing to greatly surpassing the glumes |
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| 7 | Glumes dorsally rounded, not keeled, smooth throughout, apices blunt to truncate and erose to denticulate; palea c. ½ the length of the lemma; panicles open and diffuse; lemmas equally wide as long, widest at (or near) apex, apices broadly truncate, irregularly 5 to 7 denticulate to erose, awnless; anthers longer than the lemma, caryopsis surface rugose-papillose; perennials; growing from very shallow soils; from the Iberian Peninsula and Northern Africa |
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| – | Glumes keeled, usually scabrous (at least in part), rarely upper glume smooth throughout, apices obtuse to acute-acuminate, rarely blunt to truncate, rounded to muticous; palea absent or rudimentary to ¾ the length of the lemma; panicles open and diffuse to condensed and spikelike; lemmas usually longer than wide (rarely equally wide as long), usually narrowed towards the apex, apices variable, ranging from somewhat broadly to usually narrowly truncate, usually with 2 to 5 dents (sometimes aristulate), to blunt and entire, awnless or with an awn 0.2–6+ mm long; anthers sometimes longer to usually shorter than the lemma; caryopsis surface usually smooth; perennials or annuals; usually growing from well-developed soils, less often from shallow soils, and generally reliant on soil moisture for their water supply; cosmopolitan |
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