Literature DB >> 33300995

Isoform-specific Activities of Androgen Receptor and its Splice Variants in Prostate Cancer Cells.

Harika Nagandla1, Matthew J Robertson1, Vasanta Putluri2, Nagireddy Putluri1, Cristian Coarfa1, Nancy L Weigel1.   

Abstract

Androgen receptor (AR) signaling continues to drive castration-resistant prostate cancer (CRPC) in spite of androgen deprivation therapy (ADT). Constitutively active shorter variants of AR, lacking the ligand binding domain, are frequently expressed in CRPC and have emerged as a potential mechanism for prostate cancer to escape ADT. ARv7 and ARv567es are 2 of the most commonly detected variants of AR in clinical samples of advanced, metastatic prostate cancer. It is not clear if variants of AR merely act as weaker substitutes for AR or can mediate unique isoform-specific activities different from AR. In this study, we employed LNCaP prostate cancer cell lines with inducible expression of ARv7 or ARv567es to delineate similarities and differences in transcriptomics, metabolomics, and lipidomics resulting from the activation of AR, ARv7, or ARv567es. While the majority of target genes were similarly regulated by the action of all 3 isoforms, we found a clear difference in transcriptomic activities of AR versus the variants, and a few differences between ARv7 and ARv567es. Some of the target gene regulation by AR isoforms was similar in the VCaP background as well. Differences in downstream activities of AR isoforms were also evident from comparison of the metabolome and lipidome in an LNCaP model. Overall our study implies that shorter variants of AR are capable of mediating unique downstream activities different from AR and some of these are isoform specific.
© The Author(s) 2020. Published by Oxford University Press on behalf of the Endocrine Society. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

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Keywords:  zzm321990 omics data; ARv567es; ARv7; androgen receptor; prostate cancer; splice variants

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Year:  2021        PMID: 33300995      PMCID: PMC8253248          DOI: 10.1210/endocr/bqaa227

Source DB:  PubMed          Journal:  Endocrinology        ISSN: 0013-7227            Impact factor:   5.051


  56 in total

1.  AR variant ARv567es induces carcinogenesis in a novel transgenic mouse model of prostate cancer.

Authors:  Gang Liu; Cynthia Sprenger; Shihua Sun; Kathryn Soriano Epilepsia; Kathleen Haugk; Xiaotun Zhang; Ilsa Coleman; Peter S Nelson; Stephen Plymate
Journal:  Neoplasia       Date:  2013-09       Impact factor: 5.715

2.  featureCounts: an efficient general purpose program for assigning sequence reads to genomic features.

Authors:  Yang Liao; Gordon K Smyth; Wei Shi
Journal:  Bioinformatics       Date:  2013-11-13       Impact factor: 6.937

3.  Androgen receptor splice variants bind to constitutively open chromatin and promote abiraterone-resistant growth of prostate cancer.

Authors:  Yundong He; Ji Lu; Zhenqing Ye; Siyuan Hao; Liewei Wang; Manish Kohli; Donald J Tindall; Benyi Li; Runzhi Zhu; Liguo Wang; Haojie Huang
Journal:  Nucleic Acids Res       Date:  2018-02-28       Impact factor: 16.971

4.  Stromal expression of connective tissue growth factor promotes angiogenesis and prostate cancer tumorigenesis.

Authors:  Feng Yang; Jennifer A Tuxhorn; Steven J Ressler; Stephanie J McAlhany; Truong D Dang; David R Rowley
Journal:  Cancer Res       Date:  2005-10-01       Impact factor: 12.701

5.  Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles.

Authors:  Aravind Subramanian; Pablo Tamayo; Vamsi K Mootha; Sayan Mukherjee; Benjamin L Ebert; Michael A Gillette; Amanda Paulovich; Scott L Pomeroy; Todd R Golub; Eric S Lander; Jill P Mesirov
Journal:  Proc Natl Acad Sci U S A       Date:  2005-09-30       Impact factor: 11.205

6.  Expression of androgen receptor splice variants in prostate cancer bone metastases is associated with castration-resistance and short survival.

Authors:  Emma Hörnberg; Erik Bovinder Ylitalo; Sead Crnalic; Henrik Antti; Pär Stattin; Anders Widmark; Anders Bergh; Pernilla Wikström
Journal:  PLoS One       Date:  2011-04-28       Impact factor: 3.240

7.  "Bligh and Dyer" and Folch Methods for Solid-Liquid-Liquid Extraction of Lipids from Microorganisms. Comprehension of Solvatation Mechanisms and towards Substitution with Alternative Solvents.

Authors:  Cassandra Breil; Maryline Abert Vian; Thomas Zemb; Werner Kunz; Farid Chemat
Journal:  Int J Mol Sci       Date:  2017-03-27       Impact factor: 5.923

Review 8.  Molecular mechanisms underlying resistance to androgen deprivation therapy in prostate cancer.

Authors:  Kristine M Wadosky; Shahriar Koochekpour
Journal:  Oncotarget       Date:  2016-09-27

9.  edgeR: a Bioconductor package for differential expression analysis of digital gene expression data.

Authors:  Mark D Robinson; Davis J McCarthy; Gordon K Smyth
Journal:  Bioinformatics       Date:  2009-11-11       Impact factor: 6.937

10.  Pathway-centric integrative analysis identifies RRM2 as a prognostic marker in breast cancer associated with poor survival and tamoxifen resistance.

Authors:  Nagireddy Putluri; Suman Maity; Ramakrishna Kommagani; Ramakrishna Kommangani; Chad J Creighton; Vasanta Putluri; Fengju Chen; Sarmishta Nanda; Salil Kumar Bhowmik; Atsushi Terunuma; Tiffany Dorsey; Agostina Nardone; Xiaoyong Fu; Chad Shaw; Tapasree Roy Sarkar; Rachel Schiff; John P Lydon; Bert W O'Malley; Stefan Ambs; Gokul M Das; George Michailidis; Arun Sreekumar
Journal:  Neoplasia       Date:  2014-05       Impact factor: 5.715

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  6 in total

Review 1.  From Omics to Multi-Omics Approaches for In-Depth Analysis of the Molecular Mechanisms of Prostate Cancer.

Authors:  Ekaterina Nevedomskaya; Bernard Haendler
Journal:  Int J Mol Sci       Date:  2022-06-03       Impact factor: 6.208

2.  Isoform-specific Activities of Androgen Receptor and its Splice Variants in Prostate Cancer Cells.

Authors:  Harika Nagandla; Matthew J Robertson; Vasanta Putluri; Nagireddy Putluri; Cristian Coarfa; Nancy L Weigel
Journal:  Endocrinology       Date:  2021-03-01       Impact factor: 5.051

3.  Cistrome and transcriptome analysis identifies unique androgen receptor (AR) and AR-V7 splice variant chromatin binding and transcriptional activities.

Authors:  Paul Basil; Matthew J Robertson; William E Bingman; Amit K Dash; William C Krause; Ayesha A Shafi; Badrajee Piyarathna; Cristian Coarfa; Nancy L Weigel
Journal:  Sci Rep       Date:  2022-03-30       Impact factor: 4.379

Review 4.  Advances in the Current Understanding of the Mechanisms Governing the Acquisition of Castration-Resistant Prostate Cancer.

Authors:  Yifeng Mao; Gaowei Yang; Yingbang Li; Guowu Liang; Wangwang Xu; Mingqiu Hu
Journal:  Cancers (Basel)       Date:  2022-07-31       Impact factor: 6.575

5.  Androgen receptor-mediated transcriptional repression targets cell plasticity in prostate cancer.

Authors:  Éva Erdmann; Pauline Ould Madi Berthélémy; Félicie Cottard; Charlotte Zoe Angel; Edwige Schreyer; Tao Ye; Bastien Morlet; Luc Negroni; Bruno Kieffer; Jocelyn Céraline
Journal:  Mol Oncol       Date:  2022-02-02       Impact factor: 7.449

Review 6.  Dissecting the Hormonal Signaling Landscape in Castration-Resistant Prostate Cancer.

Authors:  Fabrizio Fontana; Patrizia Limonta
Journal:  Cells       Date:  2021-05-07       Impact factor: 6.600

  6 in total

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