Literature DB >> 33300824

DNA methylation analysis of candidate genes associated with dementia in peripheral blood.

Peter D Fransquet1, Paul Lacaze1, Richard Saffery2, James Phung1, Emily Parker1, Raj C Shah3, Anne Murray4, Robyn L Woods1, Joanne Ryan1,5.   

Abstract

Aim: To investigate whether genes implicated in dementia pathogenesis are differently methylated in peripheral blood. Materials & methods: Participants included 160 cognitively healthy individuals aged 70+ years: 73 who were subsequently diagnosed with dementia and 87 controls matched on age, gender, education, smoking and baseline cognition. A total of 49 participants also provided blood samples at diagnosis. Blood DNA methylation of APOE, APP, BDNF, PIN1, SNCA and TOMM40 was examined.
Results: A total of 56 of 299 probes were differentially methylated in dementia compared with controls and 39 probes prior to diagnosis. The greatest effect size was in APP (cg19423170, Δ-8.32%, adjusted p = 0.009 at diagnosis; cg19933173, Δ-4.18%, adjusted p < 0.0001 prediagnosis).
Conclusion: Genes implicated in dementia pathogenesis show differential blood methylation in dementia, even prior to diagnosis.

Entities:  

Keywords:  APOE; APP; BDNF; DNA methylation; PIN1; SNCA; TOMM40; biomarker; blood; dementia

Year:  2020        PMID: 33300824      PMCID: PMC8008206          DOI: 10.2217/epi-2020-0236

Source DB:  PubMed          Journal:  Epigenomics        ISSN: 1750-192X            Impact factor:   4.778


  49 in total

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2.  The current status of blood epigenetic biomarkers for dementia.

Authors:  Peter D Fransquet; Joanne Ryan
Journal:  Crit Rev Clin Lab Sci       Date:  2019-07-22       Impact factor: 6.250

3.  Normative performance of healthy older individuals on the Modified Mini-Mental State (3MS) examination according to ethno-racial group, gender, age, and education level.

Authors:  Joanne Ryan; Robyn L Woods; Carlene Britt; Anne M Murray; Raj C Shah; Christopher M Reid; Brenda Kirpach; Rory S Wolfe; Mark R Nelson; Jessica E Lockery; Suzanne G Orchard; Ruth E Trevaks; John J McNeil; Elsdon Storey
Journal:  Clin Neuropsychol       Date:  2018-07-05       Impact factor: 3.535

4.  Elevation of Peripheral BDNF Promoter Methylation Predicts Conversion from Amnestic Mild Cognitive Impairment to Alzheimer's Disease: A 5-Year Longitudinal Study.

Authors:  Bing Xie; Yao Xu; Zanchao Liu; Wenxuan Liu; Lei Jiang; Rui Zhang; Dongsheng Cui; Qingfu Zhang; Shunjiang Xu
Journal:  J Alzheimers Dis       Date:  2017       Impact factor: 4.472

5.  A cross-package Bioconductor workflow for analysing methylation array data.

Authors:  Jovana Maksimovic; Belinda Phipson; Alicia Oshlack
Journal:  F1000Res       Date:  2016-06-08

6.  Normative performance of older individuals on the Hopkins Verbal Learning Test-Revised (HVLT-R) according to ethno-racial group, gender, age and education level.

Authors:  Joanne Ryan; Robyn L Woods; Anne M Murray; Raj C Shah; Carlene J Britt; Christopher M Reid; Rory Wolfe; Mark R Nelson; Jessica E Lockery; Suzanne G Orchard; Ruth E Trevaks; Trevor J Chong; John J McNeil; Elsdon Storey
Journal:  Clin Neuropsychol       Date:  2020-02-26       Impact factor: 4.373

Review 7.  A comprehensive overview of Infinium HumanMethylation450 data processing.

Authors:  Sarah Dedeurwaerder; Matthieu Defrance; Martin Bizet; Emilie Calonne; Gianluca Bontempi; François Fuks
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8.  DNA methylation in the APOE genomic region is associated with cognitive function in African Americans.

Authors:  Jiaxuan Liu; Wei Zhao; Erin B Ware; Stephen T Turner; Thomas H Mosley; Jennifer A Smith
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9.  An optimized library for reference-based deconvolution of whole-blood biospecimens assayed using the Illumina HumanMethylationEPIC BeadArray.

Authors:  Lucas A Salas; Devin C Koestler; Rondi A Butler; Helen M Hansen; John K Wiencke; Karl T Kelsey; Brock C Christensen
Journal:  Genome Biol       Date:  2018-05-29       Impact factor: 13.583

Review 10.  Role of Genetics and Epigenetics in the Pathogenesis of Alzheimer's Disease and Frontotemporal Dementia.

Authors:  Chiara Fenoglio; Elio Scarpini; Maria Serpente; Daniela Galimberti
Journal:  J Alzheimers Dis       Date:  2018       Impact factor: 4.472

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  7 in total

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Journal:  Nat Rev Neurol       Date:  2022-09-30       Impact factor: 44.711

2.  Increase in Mitochondrial D-Loop Region Methylation Levels in Mild Cognitive Impairment Individuals.

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3.  Cross-tissue analysis of blood and brain epigenome-wide association studies in Alzheimer's disease.

Authors:  Tiago C Silva; Juan I Young; Lanyu Zhang; Lissette Gomez; Michael A Schmidt; Achintya Varma; X Steven Chen; Eden R Martin; Lily Wang
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4.  Distinct sex-specific DNA methylation differences in Alzheimer's disease.

Authors:  Tiago C Silva; Wei Zhang; Juan I Young; Lissette Gomez; Michael A Schmidt; Achintya Varma; X Steven Chen; Eden R Martin; Lily Wang
Journal:  Alzheimers Res Ther       Date:  2022-09-15       Impact factor: 8.823

Review 5.  Epigenetic Peripheral Biomarkers for Early Diagnosis of Alzheimer's Disease.

Authors:  Chiara Villa; Andrea Stoccoro
Journal:  Genes (Basel)       Date:  2022-07-22       Impact factor: 4.141

6.  Acute Brain-Derived Neurotrophic Factor DNA Methylation Trajectories in Cerebrospinal Fluid and Associations With Outcomes Following Severe Traumatic Brain Injury in Adults.

Authors:  Amery Treble-Barna; Lacey W Heinsberg; Ava M Puccio; John R Shaffer; David O Okonkwo; Sue R Beers; Daniel E Weeks; Yvette P Conley
Journal:  Neurorehabil Neural Repair       Date:  2021-06-25       Impact factor: 3.919

Review 7.  Roles of physical exercise in neurodegeneration: reversal of epigenetic clock.

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Journal:  Transl Neurodegener       Date:  2021-08-13       Impact factor: 8.014

  7 in total

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