Literature DB >> 33283198

When Does Self-Supervision Help Graph Convolutional Networks?

Yuning You1, Tianlong Chen1, Zhangyang Wang1, Yang Shen1.   

Abstract

Self-supervision as an emerging technique has been employed to train convolutional neural networks (CNNs) for more transferrable, generalizable, and robust representation learning of images. Its introduction to graph convolutional networks (GCNs) operating on graph data is however rarely explored. In this study, we report the first systematic exploration and assessment of incorporating self-supervision into GCNs. We first elaborate three mechanisms to incorporate self-supervision into GCNs, analyze the limitations of pretraining & finetuning and self-training, and proceed to focus on multi-task learning. Moreover, we propose to investigate three novel self-supervised learning tasks for GCNs with theoretical rationales and numerical comparisons. Lastly, we further integrate multi-task self-supervision into graph adversarial training. Our results show that, with properly designed task forms and incorporation mechanisms, self-supervision benefits GCNs in gaining more generalizability and robustness. Our codes are available at https://github.com/Shen-Lab/SS-GCNs.

Entities:  

Year:  2020        PMID: 33283198      PMCID: PMC7714041     

Source DB:  PubMed          Journal:  Proc Mach Learn Res


  2 in total

1.  Explainable Deep Relational Networks for Predicting Compound-Protein Affinities and Contacts.

Authors:  Mostafa Karimi; Di Wu; Zhangyang Wang; Yang Shen
Journal:  J Chem Inf Model       Date:  2020-12-21       Impact factor: 4.956

Review 2.  A Comprehensive Survey on Graph Neural Networks.

Authors:  Zonghan Wu; Shirui Pan; Fengwen Chen; Guodong Long; Chengqi Zhang; Philip S Yu
Journal:  IEEE Trans Neural Netw Learn Syst       Date:  2021-01-04       Impact factor: 10.451

  2 in total
  2 in total

1.  Cross-modality and self-supervised protein embedding for compound-protein affinity and contact prediction.

Authors:  Yuning You; Yang Shen
Journal:  Bioinformatics       Date:  2022-09-16       Impact factor: 6.931

2.  Bringing Your Own View: Graph Contrastive Learning without Prefabricated Data Augmentations.

Authors:  Yuning You; Tianlong Chen; Zhangyang Wang; Yang Shen
Journal:  Proc Int Conf Web Search Data Min       Date:  2022-02-15
  2 in total

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