Literature DB >> 33282461

Nature's Machinery, Repurposed: Expanding the Repertoire of Iron-Dependent Oxygenases.

Noah P Dunham1, Frances H Arnold1.   

Abstract

Iron is an especially important redox-active cofactor in biology because of its ability to mediate reactions with atmospheric O2. Iron-dependent oxygenases exploit this earth-abundant transition metal for the insertion of oxygen atoms into organic compounds. Throughout the astounding diversity of transformations catalyzed by these enzymes, the protein framework directs reactive intermediates toward the precise formation of products, which, in many cases, necessitates the cleavage of strong C-H bonds. In recent years, members of several iron-dependent oxygenase families have been engineered for new-to-nature transformations that offer advantages over conventional synthetic methods. In this Perspective, we first explore what is known about the reactivity of heme-dependent cytochrome P450 oxygenases and nonheme iron-dependent oxygenases bearing the 2-His-1-carboxylate facial triad by reviewing mechanistic studies with an emphasis on how the protein scaffold maximizes the catalytic potential of the iron-heme and iron cofactors. We then review how these cofactors have been repurposed for abiological transformations by engineering the protein frameworks of these enzymes. Finally, we discuss contemporary challenges associated with engineering these platforms and comment on their roles in biocatalysis moving forward.

Entities:  

Keywords:  biocatalysis; cytochrome P450; directed evolution; enzymology; mechanism; oxygenase

Year:  2020        PMID: 33282461      PMCID: PMC7710332          DOI: 10.1021/acscatal.0c03606

Source DB:  PubMed          Journal:  ACS Catal            Impact factor:   13.084


  168 in total

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Journal:  Chemistry       Date:  2011-02-24       Impact factor: 5.236

3.  Site-selective aliphatic C-H bromination using N-bromoamides and visible light.

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4.  Repurposing Nonheme Iron Hydroxylases To Enable Catalytic Nitrile Installation through an Azido Group Assistance.

Authors:  Madison Davidson; Meredith McNamee; Ruixi Fan; Yisong Guo; Wei-Chen Chang
Journal:  J Am Chem Soc       Date:  2019-02-18       Impact factor: 15.419

5.  Cytochrome P-450--catalyzed formation of delta 4-VPA, a toxic metabolite of valproic acid.

Authors:  A E Rettie; A W Rettenmeier; W N Howald; T A Baillie
Journal:  Science       Date:  1987-02-20       Impact factor: 47.728

6.  Enantioselective, intermolecular benzylic C-H amination catalysed by an engineered iron-haem enzyme.

Authors:  Christopher K Prier; Ruijie K Zhang; Andrew R Buller; Sabine Brinkmann-Chen; Frances H Arnold
Journal:  Nat Chem       Date:  2017-05-29       Impact factor: 24.427

7.  Enantioselective Aminohydroxylation of Styrenyl Olefins Catalyzed by an Engineered Hemoprotein.

Authors:  Inha Cho; Christopher K Prier; Zhi-Jun Jia; Ruijie K Zhang; Tamás Görbe; Frances H Arnold
Journal:  Angew Chem Int Ed Engl       Date:  2019-01-25       Impact factor: 15.336

8.  Enantioselective intramolecular C-H amination catalyzed by engineered cytochrome P450 enzymes in vitro and in vivo.

Authors:  John A McIntosh; Pedro S Coelho; Christopher C Farwell; Z Jane Wang; Jared C Lewis; Tristan R Brown; Frances H Arnold
Journal:  Angew Chem Int Ed Engl       Date:  2013-07-24       Impact factor: 15.336

9.  Crystal structure of a clavaminate synthase-Fe(II)-2-oxoglutarate-substrate-NO complex: evidence for metal centered rearrangements.

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Journal:  FEBS Lett       Date:  2002-04-24       Impact factor: 4.124

10.  P450-catalyzed intramolecular sp3 C-H amination with arylsulfonyl azide substrates.

Authors:  Ritesh Singh; Melanie Bordeaux; Rudi Fasan
Journal:  ACS Catal       Date:  2014-01-06       Impact factor: 13.084

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  10 in total

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Authors:  Warispreet Singh; Sónia F G Santos; Paul James; Gary W Black; Meilan Huang; Kshatresh Dutta Dubey
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3.  Biocatalytic One-Carbon Ring Expansion of Aziridines to Azetidines via a Highly Enantioselective [1,2]-Stevens Rearrangement.

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4.  Substrate-Specific Coupling of O2 Activation to Hydroxylations of Aromatic Compounds by Rieske Non-heme Iron Dioxygenases.

Authors:  Sarah G Pati; Charlotte E Bopp; Hans-Peter E Kohler; Thomas B Hofstetter
Journal:  ACS Catal       Date:  2022-05-16       Impact factor: 13.700

5.  The Apparently Unreactive Substrate Facilitates the Electron Transfer for Dioxygen Activation in Rieske Dioxygenases.

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6.  Binding of Dual-Function Hybridized Metal-Organic Capsules to Enzymes for Cascade Catalysis.

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7.  Second Coordination Sphere Effects on the Mechanistic Pathways for Dioxygen Activation by a Ferritin: Involvement of a Tyr Radical and the Identification of a Cation Binding Site.

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8.  Widely Distributed Bifunctional Bacterial Cytochrome P450 Enzymes Catalyze both Intramolecular C-C Bond Formation in cyclo-l-Tyr-l-Tyr and Its Coupling with Nucleobases.

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Review 10.  A Unique P450 Peroxygenase System Facilitated by a Dual-Functional Small Molecule: Concept, Application, and Perspective.

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  10 in total

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