Literature DB >> 33279866

Histone tails as signaling antennas of chromatin.

Yunhui Peng1, Shuxiang Li2, David Landsman1, Anna R Panchenko3.   

Abstract

Histone tails, representing the N-terminal or C-terminal regions flanking the histone core, play essential roles in chromatin signaling networks. Intrinsic disorder of histone tails and their propensity for post-translational modifications allow them to serve as hubs in coordination of epigenetic processes within the nucleosomal context. Deposition of histone variants with distinct histone tail properties further enriches histone tails' repertoire in epigenetic signaling. Given the advances in experimental techniques and in silico modelling, we review the most recent data on histone tails' effects on nucleosome stability and dynamics, their function in regulating chromatin accessibility and folding. Finally, we discuss different molecular mechanisms to understand how histone tails are involved in nucleosome recognition by binding partners and formation of higher-order chromatin structures. Published by Elsevier Ltd.

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Year:  2020        PMID: 33279866      PMCID: PMC8096652          DOI: 10.1016/j.sbi.2020.10.018

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  57 in total

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Authors:  Ruihan Zhang; Jochen Erler; Jörg Langowski
Journal:  Biophys J       Date:  2016-12-06       Impact factor: 4.033

4.  Molecular Mechanism for the Role of the H2A and H2B Histone Tails in Nucleosome Repositioning.

Authors:  Kaushik Chakraborty; Myungshim Kang; Sharon M Loverde
Journal:  J Phys Chem B       Date:  2018-12-07       Impact factor: 2.991

Review 5.  Fuzziness in Protein Interactions-A Historical Perspective.

Authors:  Monika Fuxreiter
Journal:  J Mol Biol       Date:  2018-02-23       Impact factor: 5.469

6.  'SPKK' motifs prefer to bind to DNA at A/T-rich sites.

Authors:  M E Churchill; M Suzuki
Journal:  EMBO J       Date:  1989-12-20       Impact factor: 11.598

7.  Accessibility of the histone H3 tail in the nucleosome for binding of paired readers.

Authors:  Jovylyn Gatchalian; Xiaodong Wang; Jinzen Ikebe; Khan L Cox; Adam H Tencer; Yi Zhang; Nathaniel L Burge; Luo Di; Matthew D Gibson; Catherine A Musselman; Michael G Poirier; Hidetoshi Kono; Jeffrey J Hayes; Tatiana G Kutateladze
Journal:  Nat Commun       Date:  2017-11-14       Impact factor: 14.919

Review 8.  Reading More than Histones: The Prevalence of Nucleic Acid Binding among Reader Domains.

Authors:  Tyler M Weaver; Emma A Morrison; Catherine A Musselman
Journal:  Molecules       Date:  2018-10-12       Impact factor: 4.411

9.  Histone H2A variants confer specific properties to nucleosomes and impact on chromatin accessibility.

Authors:  Akihisa Osakabe; Zdravko J Lorkovic; Wataru Kobayashi; Hiroaki Tachiwana; Ramesh Yelagandula; Hitoshi Kurumizaka; Frédéric Berger
Journal:  Nucleic Acids Res       Date:  2018-09-06       Impact factor: 16.971

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  10 in total

1.  DNA methylation cues in nucleosome geometry, stability and unwrapping.

Authors:  Shuxiang Li; Yunhui Peng; David Landsman; Anna R Panchenko
Journal:  Nucleic Acids Res       Date:  2022-02-28       Impact factor: 16.971

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Review 3.  What Are the Potential Roles of Nuclear Perlecan and Other Heparan Sulphate Proteoglycans in the Normal and Malignant Phenotype.

Authors:  Anthony J Hayes; James Melrose
Journal:  Int J Mol Sci       Date:  2021-04-23       Impact factor: 5.923

4.  Nucleosome-induced homology recognition in chromatin.

Authors:  Jonathan G Hedley; Vladimir B Teif; Alexei A Kornyshev
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Review 5.  Concerto on Chromatin: Interplays of Different Epigenetic Mechanisms in Plant Development and Environmental Adaptation.

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Review 6.  Emerging Contributions of Solid-State NMR Spectroscopy to Chromatin Structural Biology.

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Review 7.  When Order Meets Disorder: Modeling and Function of the Protein Interface in Fuzzy Complexes.

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8.  FACT modulates the conformations of histone H2A and H2B N-terminal tails within nucleosomes.

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Review 9.  Priming seeds for the future: Plant immune memory and application in crop protection.

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Review 10.  Transcriptionally Active Chromatin-Lessons Learned from the Chicken Erythrocyte Chromatin Fractionation.

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  10 in total

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