Literature DB >> 33278361

A Role for the Mre11-Rad50-Xrs2 Complex in Gene Expression and Chromosome Organization.

Romain Forey1, Antoine Barthe1, Mireille Tittel-Elmer2, Maxime Wery3, Marie-Bénédicte Barrault4, Cécile Ducrot5, Andrew Seeber6, Nils Krietenstein7, Ugo Szachnowski3, Magdalena Skrzypczak8, Krzysztof Ginalski8, Maga Rowicka9, Jennifer A Cobb2, Oliver J Rando7, Julie Soutourina4, Michel Werner10, Karine Dubrana5, Susan M Gasser11, Antonin Morillon3, Philippe Pasero1, Armelle Lengronne12, Jérôme Poli13.   

Abstract

Mre11-Rad50-Xrs2 (MRX) is a highly conserved complex with key roles in various aspects of DNA repair. Here, we report a new function for MRX in limiting transcription in budding yeast. We show that MRX interacts physically and colocalizes on chromatin with the transcriptional co-regulator Mediator. MRX restricts transcription of coding and noncoding DNA by a mechanism that does not require the nuclease activity of Mre11. MRX is required to tether transcriptionally active loci to the nuclear pore complex (NPC), and it also promotes large-scale gene-NPC interactions. Moreover, MRX-mediated chromatin anchoring to the NPC contributes to chromosome folding and helps to control gene expression. Together, these findings indicate that MRX has a role in transcription and chromosome organization that is distinct from its known function in DNA repair.
Copyright © 2020 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  MRX/N; Mediator; SMC complexes; chromosomal interaction domains; chromosome folding; chromosome organization; coding and non-coding transcription control; nuclear pore

Mesh:

Substances:

Year:  2020        PMID: 33278361      PMCID: PMC8112817          DOI: 10.1016/j.molcel.2020.11.010

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  91 in total

Review 1.  The Mre11 complex: at the crossroads of dna repair and checkpoint signalling.

Authors:  Damien D'Amours; Stephen P Jackson
Journal:  Nat Rev Mol Cell Biol       Date:  2002-05       Impact factor: 94.444

2.  Mec1 Is Activated at the Onset of Normal S Phase by Low-dNTP Pools Impeding DNA Replication.

Authors:  Romain Forey; Ana Poveda; Sushma Sharma; Antoine Barthe; Ismael Padioleau; Claire Renard; Robin Lambert; Magdalena Skrzypczak; Krzysztof Ginalski; Armelle Lengronne; Andrei Chabes; Benjamin Pardo; Philippe Pasero
Journal:  Mol Cell       Date:  2020-03-12       Impact factor: 17.970

Review 3.  SMC complexes: from DNA to chromosomes.

Authors:  Frank Uhlmann
Journal:  Nat Rev Mol Cell Biol       Date:  2016-04-14       Impact factor: 94.444

Review 4.  Transcription regulation by the Mediator complex.

Authors:  Julie Soutourina
Journal:  Nat Rev Mol Cell Biol       Date:  2017-12-06       Impact factor: 94.444

5.  Developmentally induced changes in transcriptional program alter spatial organization across chromosomes.

Authors:  Jason M Casolari; Christopher R Brown; David A Drubin; Oliver J Rando; Pamela A Silver
Journal:  Genes Dev       Date:  2005-05-15       Impact factor: 11.361

6.  XUTs are a class of Xrn1-sensitive antisense regulatory non-coding RNA in yeast.

Authors:  E L van Dijk; C L Chen; Y d'Aubenton-Carafa; S Gourvennec; M Kwapisz; V Roche; C Bertrand; M Silvain; P Legoix-Né; S Loeillet; A Nicolas; C Thermes; A Morillon
Journal:  Nature       Date:  2011-06-22       Impact factor: 49.962

7.  Cohesin association to replication sites depends on rad50 and promotes fork restart.

Authors:  Mireille Tittel-Elmer; Armelle Lengronne; Marta B Davidson; Julien Bacal; Philippe François; Marcel Hohl; John H J Petrini; Philippe Pasero; Jennifer A Cobb
Journal:  Mol Cell       Date:  2012-08-09       Impact factor: 17.970

8.  Motion as a phenotype: the use of live-cell imaging and machine visual screening to characterize transcription-dependent chromosome dynamics.

Authors:  David A Drubin; Arman M Garakani; Pamela A Silver
Journal:  BMC Cell Biol       Date:  2006-04-24       Impact factor: 4.241

9.  Different distribution of histone modifications in genes with unidirectional and bidirectional transcription and a role of CTCF and cohesin in directing transcription.

Authors:  Susanne Bornelöv; Jan Komorowski; Claes Wadelius
Journal:  BMC Genomics       Date:  2015-04-15       Impact factor: 3.969

10.  The Nuclear Pore-Associated TREX-2 Complex Employs Mediator to Regulate Gene Expression.

Authors:  Maren Schneider; Doris Hellerschmied; Tobias Schubert; Stefan Amlacher; Vinesh Vinayachandran; Rohit Reja; B Franklin Pugh; Tim Clausen; Alwin Köhler
Journal:  Cell       Date:  2015-08-27       Impact factor: 41.582

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  3 in total

1.  Sir3 heterochromatin protein promotes non-homologous end joining by direct inhibition of Sae2.

Authors:  Hélène Bordelet; Rafaël Costa; Clémentine Brocas; Jordane Dépagne; Xavier Veaute; Didier Busso; Amandine Batté; Raphaël Guérois; Stéphane Marcand; Karine Dubrana
Journal:  EMBO J       Date:  2021-11-24       Impact factor: 11.598

2.  3D positioning of tagged DNA loci by widefield and super-resolution fluorescence imaging of fixed yeast nuclei.

Authors:  Mégane Da Mota; Julien Cau; Julio Mateos-Langerak; Armelle Lengronne; Philippe Pasero; Jérôme Poli
Journal:  STAR Protoc       Date:  2021-05-07

3.  A nuclear pore sub-complex restricts the propagation of Ty retrotransposons by limiting their transcription.

Authors:  Amandine Bonnet; Carole Chaput; Noé Palmic; Benoit Palancade; Pascale Lesage
Journal:  PLoS Genet       Date:  2021-11-01       Impact factor: 5.917

  3 in total

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