| Literature DB >> 33277752 |
Julien Delarocque1, Florian Frers1, Karsten Feige1, Korinna Huber2, Klaus Jung3, Tobias Warnken1.
Abstract
BACKGROUND: Little is known about the implications of hyperinsulinemia on energy metabolism, and such knowledge might help understand the pathophysiology of insulin dysregulation.Entities:
Keywords: EMS; biomarker; insulin dysregulation; metabolomics; oral glucose test
Mesh:
Substances:
Year: 2020 PMID: 33277752 PMCID: PMC7848347 DOI: 10.1111/jvim.15992
Source DB: PubMed Journal: J Vet Intern Med ISSN: 0891-6640 Impact factor: 3.175
Metabolites available before and after data preprocessing. Summarized values are the sums of plasma concentrations of metabolites by groups (eg, sum of acylcarnitines) or ratios such as the kynurenine : tryptohphan ratio, which is of interest in the scope of inflammatory processes
| Metabolite class | Before preprocessing | After preprocessing |
|---|---|---|
| Acylcarnitines | 40 | 7 |
| Amino acids | 21 | 21 |
| Biogenic amines | 21 | 20 |
| Glycerophospholipids | 90 | 75 |
| Sphingolipids | 15 | 15 |
| Sugars | 1 | 1 |
| Summarized values | 6 | 6 |
| Sum | 194 | 145 |
FIGURE 1Heatmap of the relative metabolite concentrations for the metabolites significantly associated with (A) time during the oral glucose test (OGT) and (B) area under the insulin curve over time (AUCins). Each column of the heatmap represents a sample and each row a metabolite. In A, the samples are grouped by time point, whereas in B they are ordered by AUCins in ascending order. Metabolite names are displayed on the right side with associated fold change and adjusted P‐values. In the case of numeric predictors like “Time” or “AUCins,” the log2 fold change (logFC) given by the “limma” package represents the slope of the regression line. For each unit of the predictor (eg, time in minutes), the log2‐transformed normalized metabolite concentrations thus increase by log2 FC. Note that all lysophosphatidylcholines decreased over time—as on average the colored tiles are darker at 0 than 180 minutes—whereas phosphatidylcholines increased. The associations between metabolites and AUCins were less apparent, because there was more individual variability
Indicators of model performance for the baseline and 120 minutes partial least‐squares discriminant analysis (PLS‐DA) as obtained by leave‐one‐out‐cross‐validation on all samples. Positive and negative predictive values were calculated using a prevalence of 22.5%
| Parameter | Baseline | 120 minutes |
|---|---|---|
| Accuracy | 83% (67%‐94%) | 83% (67%‐94%) |
| Sensitivity | 78% (52%‐94%) | 83% (59%‐96%) |
| Specificity | 89% (65%‐99%) | 83% (59%‐96%) |
| Positive predictive value | 68% (32%‐93%) | 60% (28%‐86%) |
| Negative predictive value | 93% (76%‐99%) | 94% (77%‐100%) |
FIGURE 2Dumbbell plot of the scaled Variable Importance in Projection (VIP) scores of the top 10 metabolites from the baseline and 120 minutes partial least‐squares discriminant analysis (PLS‐DA) models. The scaling of the scores allows for a better comparability between models. As there is some overlap between the 10 metabolites in each model, the combination of both rankings results in the 15 metabolites displayed here. The dark segments between pairs of points represent the difference in relative importance of the metabolites. Large differences indicate that although the metabolite is very helpful in distinguishing horses with a high area under the insulin curve over time (AUCins) from horses with a low 1in‐ model, the difference between both groups regarding this metabolite is less striking at the other time point
FIGURE 3Model performance estimates on the baseline samples obtained by bootstrap cross‐validation depending on the number of metabolites included. Positive Predictive Value (PPV) and Negative Predictive Value (NPV) were obtained using abovementioned formulas and the mean of previously reported prevalence of hyperinsulinemia. , , The 95% confidence interval is shown as a shaded area behind each estimate. Overall, best model performance is reached with the top 7 and top 20 metabolites as determined by the baseline partial least‐squares discriminant analysis (PLS‐DA) model including all metabolites