Literature DB >> 33277043

Next-Generation CRISPR Technologies and Their Applications in Gene and Cell Therapy.

M Alejandra Zeballos C1, Thomas Gaj2.   

Abstract

The emergence of clustered regularly interspaced short palindromic repeat (CRISPR) nucleases has transformed biotechnology by providing an easy, efficient, and versatile platform for editing DNA. However, traditional CRISPR-based technologies initiate editing by activating DNA double-strand break (DSB) repair pathways, which can cause adverse effects in cells and restrict certain therapeutic applications of the technology. To this end, several new CRISPR-based modalities have been developed that are capable of catalyzing editing without the requirement for a DSB. Here, we review three of these technologies: base editors, prime editors, and RNA-targeting CRISPR-associated protein (Cas)13 effectors. We discuss their strengths compared to traditional gene-modifying systems, we highlight their emerging therapeutic applications, and we examine challenges facing their safe and effective clinical implementation.
Copyright © 2020 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  CRISPR; CRISPR-Cas13; base editing; gene therapy; prime editing

Mesh:

Substances:

Year:  2021        PMID: 33277043      PMCID: PMC8166939          DOI: 10.1016/j.tibtech.2020.10.010

Source DB:  PubMed          Journal:  Trends Biotechnol        ISSN: 0167-7799            Impact factor:   21.942


  119 in total

1.  Pathways of DNA double-strand break repair during the mammalian cell cycle.

Authors:  Kai Rothkamm; Ines Krüger; Larry H Thompson; Markus Löbrich
Journal:  Mol Cell Biol       Date:  2003-08       Impact factor: 4.272

Review 2.  A guide to genome engineering with programmable nucleases.

Authors:  Hyongbum Kim; Jin-Soo Kim
Journal:  Nat Rev Genet       Date:  2014-04-02       Impact factor: 53.242

3.  Therapeutic base editing of human hematopoietic stem cells.

Authors:  Jing Zeng; Yuxuan Wu; Chunyan Ren; Jasmine Bonanno; Anne H Shen; Devlin Shea; Jason M Gehrke; Kendell Clement; Kevin Luk; Qiuming Yao; Rachel Kim; Scot A Wolfe; John P Manis; Luca Pinello; J Keith Joung; Daniel E Bauer
Journal:  Nat Med       Date:  2020-03-16       Impact factor: 53.440

4.  RNA-guided human genome engineering via Cas9.

Authors:  Prashant Mali; Luhan Yang; Kevin M Esvelt; John Aach; Marc Guell; James E DiCarlo; Julie E Norville; George M Church
Journal:  Science       Date:  2013-01-03       Impact factor: 47.728

5.  Web-based design and analysis tools for CRISPR base editing.

Authors:  Gue-Ho Hwang; Jeongbin Park; Kayeong Lim; Sunghyun Kim; Jihyeon Yu; Eunchong Yu; Sang-Tae Kim; Roland Eils; Jin-Soo Kim; Sangsu Bae
Journal:  BMC Bioinformatics       Date:  2018-12-27       Impact factor: 3.169

6.  Multifunctional CRISPR-Cas9 with engineered immunosilenced human T cell epitopes.

Authors:  Shayesteh R Ferdosi; Radwa Ewaisha; Farzaneh Moghadam; Sri Krishna; Jin G Park; Mo R Ebrahimkhani; Samira Kiani; Karen S Anderson
Journal:  Nat Commun       Date:  2019-04-23       Impact factor: 14.919

7.  Genome-wide profiling of adenine base editor specificity by EndoV-seq.

Authors:  Puping Liang; Xiaowei Xie; Shengyao Zhi; Hongwei Sun; Xiya Zhang; Yu Chen; Yuxi Chen; Yuanyan Xiong; Wenbin Ma; Dan Liu; Junjiu Huang; Zhou Songyang
Journal:  Nat Commun       Date:  2019-01-08       Impact factor: 14.919

8.  Long-term evaluation of AAV-CRISPR genome editing for Duchenne muscular dystrophy.

Authors:  Christopher E Nelson; Yaoying Wu; Matthew P Gemberling; Matthew L Oliver; Matthew A Waller; Joel D Bohning; Jacqueline N Robinson-Hamm; Karen Bulaklak; Ruth M Castellanos Rivera; Joel H Collier; Aravind Asokan; Charles A Gersbach
Journal:  Nat Med       Date:  2019-02-18       Impact factor: 53.440

9.  CRISPR artificial splicing factors.

Authors:  Menghan Du; Nathaniel Jillette; Jacqueline Jufen Zhu; Sheng Li; Albert Wu Cheng
Journal:  Nat Commun       Date:  2020-06-12       Impact factor: 14.919

10.  Functionalized lipid-like nanoparticles for in vivo mRNA delivery and base editing.

Authors:  Xinfu Zhang; Weiyu Zhao; Giang N Nguyen; Chengxiang Zhang; Chunxi Zeng; Jingyue Yan; Shi Du; Xucheng Hou; Wenqing Li; Justin Jiang; Binbin Deng; David W McComb; Robert Dorkin; Aalok Shah; Luis Barrera; Francine Gregoire; Manmohan Singh; Delai Chen; Denise E Sabatino; Yizhou Dong
Journal:  Sci Adv       Date:  2020-08-21       Impact factor: 14.136

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  17 in total

Review 1.  Improvement of base editors and prime editors advances precision genome engineering in plants.

Authors:  Kai Hua; Peijin Han; Jian-Kang Zhu
Journal:  Plant Physiol       Date:  2022-03-28       Impact factor: 8.340

2.  Highly efficient generation of isogenic pluripotent stem cell models using prime editing.

Authors:  Hanqin Li; Oriol Busquets; Yogendra Verma; Khaja Mohieddin Syed; Nitzan Kutnowski; Gabriella R Pangilinan; Luke A Gilbert; Helen S Bateup; Donald C Rio; Dirk Hockemeyer; Frank Soldner
Journal:  Elife       Date:  2022-09-07       Impact factor: 8.713

Review 3.  Modeling genetic diseases in nonhuman primates through embryonic and germline modification: Considerations and challenges.

Authors:  Jenna K Schmidt; Kathryn M Jones; Trevor Van Vleck; Marina E Emborg
Journal:  Sci Transl Med       Date:  2022-03-02       Impact factor: 19.319

Review 4.  Circular RNA and Its Roles in the Occurrence, Development, Diagnosis of Cancer.

Authors:  Yue Zhang; Xinyi Zhang; Yumeng Xu; Shikun Fang; Ying Ji; Ling Lu; Wenrong Xu; Hui Qian; Zhao Feng Liang
Journal:  Front Oncol       Date:  2022-04-07       Impact factor: 5.738

5.  BSA-PEI Nanoparticle Mediated Efficient Delivery of CRISPR/Cas9 into MDA-MB-231 Cells.

Authors:  Hossein Rahimi; Kasra Arbabi Zaboli; Jose Thekkiniath; Seyed Hossein Mousavi; Behrooz Johari; Mohammad Reza Hashemi; Hamed Nosrati; David Goldschneider; Agnes Bernet; Hossein Danafar; Saeed Kaboli
Journal:  Mol Biotechnol       Date:  2022-06-07       Impact factor: 2.860

6.  Germline genome modification through novel political, ethical, and social lenses.

Authors:  Vicki Xafis; G Owen Schaefer; Markus K Labude; Yujia Zhu; Soren Holm; Roger Sik-Yin Foo; Poh San Lai; Ruth Chadwick
Journal:  PLoS Genet       Date:  2021-09-09       Impact factor: 5.917

Review 7.  The Utility of Genomic Testing for Hyperphenylalaninemia.

Authors:  Elisabetta Anna Tendi; Maria Guarnaccia; Giovanna Morello; Sebastiano Cavallaro
Journal:  J Clin Med       Date:  2022-02-18       Impact factor: 4.964

8.  Highly efficient prime editing by introducing same-sense mutations in pegRNA or stabilizing its structure.

Authors:  Xiaosa Li; Lina Zhou; Bao-Qing Gao; Guangye Li; Xiao Wang; Ying Wang; Jia Wei; Wenyan Han; Zixian Wang; Jifang Li; Runze Gao; Junjie Zhu; Wenchao Xu; Jing Wu; Bei Yang; Xiaodong Sun; Li Yang; Jia Chen
Journal:  Nat Commun       Date:  2022-03-29       Impact factor: 14.919

Review 9.  Take a Break to Repair: A Dip in the World of Double-Strand Break Repair Mechanisms Pointing the Gaze on Archaea.

Authors:  Mariarosaria De Falco; Mariarita De Felice
Journal:  Int J Mol Sci       Date:  2021-12-10       Impact factor: 5.923

Review 10.  Microfluidic processing of stem cells for autologous cell replacement.

Authors:  Nicholas E Stone; Andrew P Voigt; Robert F Mullins; Todd Sulchek; Budd A Tucker
Journal:  Stem Cells Transl Med       Date:  2021-06-22       Impact factor: 6.940

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