Literature DB >> 33275410

One-Enzyme Reverse Transcription qPCR Using Taq DNA Polymerase.

Sanchita Bhadra1, Andre C Maranhao1, Inyup Paik1, Andrew D Ellington2.   

Abstract

Taq DNA polymerase, one of the first thermostable DNA polymerases to be discovered, has been typecast as a DNA-dependent DNA polymerase commonly employed for PCR. However, Taq polymerase belongs to the same DNA polymerase superfamily as the Molony murine leukemia virus reverse transcriptase and has in the past been shown to possess reverse transcriptase activity. We report optimized buffer and salt compositions that promote the reverse transcriptase activity of Taq DNA polymerase and thereby allow it to be used as the sole enzyme in TaqMan RT-qPCRs. We demonstrate the utility of Taq-alone RT-qPCRs by executing CDC SARS-CoV-2 N1, N2, and N3 TaqMan RT-qPCR assays that could detect as few as 2 copies/μL of input viral genomic RNA.

Entities:  

Year:  2020        PMID: 33275410     DOI: 10.1021/acs.biochem.0c00778

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  5 in total

1.  Homebrew reagents for low-cost RT-LAMP.

Authors:  Tamara Matute; Isaac Nuñez; Maira Rivera; Javiera Reyes; Paula Blázquez-Sánchez; Aníbal Arce; Alexander J Brown; Chiara Gandini; Jennifer Molloy; César A Ramírez-Sarmiento; Fernán Federici
Journal:  J Biomol Tech       Date:  2021-09

2.  A One-Step open RT-qPCR for SARS-CoV-2 detection.

Authors:  Ariel Cerda; Maira Rivera; Grace Armijo; Catalina Ibarra-Henriquez; Javiera Reyes; Paula Blázquez-Sánchez; Javiera Avilés; Aníbal Arce; Aldo Seguel; Alexander J Brown; Yesseny Vásquez; Marcelo Cortez-San Martín; Francisco Cubillos; Patricia García; Marcela Ferres; César A Ramírez-Sarmiento; Fernán Federici; Rodrigo A Gutiérrez
Journal:  medRxiv       Date:  2021-12-07

Review 3.  Loop-Mediated Isothermal Amplification Detection of SARS-CoV-2 and Myriad Other Applications.

Authors:  Keith J M Moore; Jeremy Cahill; Guy Aidelberg; Rachel Aronoff; Ali Bektaş; Daniela Bezdan; Daniel J Butler; Sridar V Chittur; Martin Codyre; Fernan Federici; Nathan A Tanner; Scott W Tighe; Randy True; Sarah B Ware; Anne L Wyllie; Evan E Afshin; Andres Bendesky; Connie B Chang; Richard Dela Rosa; Eran Elhaik; David Erickson; Andrew S Goldsborough; George Grills; Kathrin Hadasch; Andrew Hayden; Seong-Young Her; Julie A Karl; Chang Hee Kim; Alison J Kriegel; Thomas Kunstman; Zeph Landau; Kevin Land; Bradley W Langhorst; Ariel B Lindner; Benjamin E Mayer; Lee A McLaughlin; Matthew T McLaughlin; Jenny Molloy; Christopher Mozsary; Jerry L Nadler; Melinee D'Silva; David Ng; David H O'Connor; Jerry E Ongerth; Olayinka Osuolale; Ana Pinharanda; Dennis Plenker; Ravi Ranjan; Michael Rosbash; Assaf Rotem; Jacob Segarra; Stephan Schürer; Scott Sherrill-Mix; Helena Solo-Gabriele; Shaina To; Merly C Vogt; Albert D Yu; Christopher E Mason
Journal:  J Biomol Tech       Date:  2021-09

4.  Homebrew reagents for low cost RT-LAMP.

Authors:  Tamara Matute; Isaac Nuñez; Maira Rivera; Javiera Reyes; Paula Blázquez-Sánchez; Aníbal Arce; Alexander J Brown; Chiara Gandini; Jennifer Molloy; César A Ramirez-Sarmiento; Fernán Federici
Journal:  medRxiv       Date:  2021-05-12

5.  RT-qPCR Detection of SARS-CoV-2: No Need for a Dedicated Reverse Transcription Step.

Authors:  Stephen A Bustin; Gregory L Shipley; Sara Kirvell; Reinhold Mueller; Tania Nolan
Journal:  Int J Mol Sci       Date:  2022-01-24       Impact factor: 5.923

  5 in total

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