Literature DB >> 33266893

Information Thermodynamics for Time Series of Signal-Response Models.

Andrea Auconi1, Andrea Giansanti2,3, Edda Klipp1.   

Abstract

The entropy production in stochastic dynamical systems is linked to the structure of their causal representation in terms of Bayesian networks. Such a connection was formalized for bipartite (or multipartite) systems with an integral fluctuation theorem in [Phys. Rev. Lett. 111, 180603 (2013)]. Here we introduce the information thermodynamics for time series, that are non-bipartite in general, and we show that the link between irreversibility and information can only result from an incomplete causal representation. In particular, we consider a backward transfer entropy lower bound to the conditional time series irreversibility that is induced by the absence of feedback in signal-response models. We study such a relation in a linear signal-response model providing analytical solutions, and in a nonlinear biological model of receptor-ligand systems where the time series irreversibility measures the signaling efficiency.

Entities:  

Keywords:  causal influence; fluctuation theorems; irreversibility; time series; transfer entropy

Year:  2019        PMID: 33266893      PMCID: PMC7514659          DOI: 10.3390/e21020177

Source DB:  PubMed          Journal:  Entropy (Basel)        ISSN: 1099-4300            Impact factor:   2.524


  31 in total

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Authors:  Gasper Tkacik; Curtis G Callan; William Bialek
Journal:  Proc Natl Acad Sci U S A       Date:  2008-08-21       Impact factor: 11.205

7.  Exploration of synergistic and redundant information sharing in static and dynamical Gaussian systems.

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Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2015-05-08

8.  Short-term integration of Cdc25 dynamics controls mitotic entry during Drosophila gastrulation.

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9.  Optimizing information flow in small genetic networks.

Authors:  Gasper Tkacik; Aleksandra M Walczak; William Bialek
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2009-09-29

10.  Backward transfer entropy: Informational measure for detecting hidden Markov models and its interpretations in thermodynamics, gambling and causality.

Authors:  Sosuke Ito
Journal:  Sci Rep       Date:  2016-11-11       Impact factor: 4.379

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