Literature DB >> 33260921

Systematic Review of Sequencing Studies and Gene Expression Profiling in Familial Meniere Disease.

Alba Escalera-Balsera1, Pablo Roman-Naranjo1, Jose Antonio Lopez-Escamez1,2,3.   

Abstract

Familial Meniere Disease (FMD) is a rare inner ear disorder characterized by episodic vertigo associated with sensorineural hearing loss, tinnitus and/or aural fullness. We conducted a systematic review to find sequencing studies segregating rare variants in FMD to obtain evidence to support candidate genes for MD. After evaluating the quality of the retrieved records, eight studies were selected to carry out a quantitative synthesis. These articles described 20 single nucleotide variants (SNVs) in 11 genes (FAM136A, DTNA, PRKCB, COCH, DPT, SEMA3D, STRC, HMX2, TMEM55B, OTOG and LSAMP), most of them in singular families-the exception being the OTOG gene. Furthermore, we analyzed the pathogenicity of each SNV and compared its allelic frequency with reference datasets to evaluate its role in the pathogenesis of FMD. By retrieving gene expression data in these genes from different databases, we could classify them according to their gene expression in neural or inner ear tissues. Finally, we evaluated the pattern of inheritance to conclude which genes show an autosomal dominant (AD) or autosomal recessive (AR) inheritance in FMD.

Entities:  

Keywords:  Mendelian disorders; Meniere’s disease; exome sequencing; familial segregation; inheritance pattern; rare variant; sensorineural hearing loss; single nucleotide variant; vestibular disorders

Mesh:

Year:  2020        PMID: 33260921      PMCID: PMC7761472          DOI: 10.3390/genes11121414

Source DB:  PubMed          Journal:  Genes (Basel)        ISSN: 2073-4425            Impact factor:   4.096


  57 in total

1.  SynaptomeDB: an ontology-based knowledgebase for synaptic genes.

Authors:  Mehdi Pirooznia; Tao Wang; Dimitrios Avramopoulos; David Valle; Gareth Thomas; Richard L Huganir; Fernando S Goes; James B Potash; Peter P Zandi
Journal:  Bioinformatics       Date:  2012-01-27       Impact factor: 6.937

2.  Cochlin immunostaining of inner ear pathologic deposits and proteomic analysis in DFNA9 deafness and vestibular dysfunction.

Authors:  Nahid G Robertson; Cor W R J Cremers; Patrick L M Huygen; Tetsuo Ikezono; Bryan Krastins; Hannie Kremer; Sharon F Kuo; M Charles Liberman; Saumil N Merchant; Constance E Miller; Joseph B Nadol; David A Sarracino; Wim I M Verhagen; Cynthia C Morton
Journal:  Hum Mol Genet       Date:  2006-02-15       Impact factor: 6.150

3.  The local transcriptome in the synaptic neuropil revealed by deep sequencing and high-resolution imaging.

Authors:  Iván J Cajigas; Georgi Tushev; Tristan J Will; Susanne tom Dieck; Nicole Fuerst; Erin M Schuman
Journal:  Neuron       Date:  2012-05-10       Impact factor: 17.173

4.  SHIELD: an integrative gene expression database for inner ear research.

Authors:  Jun Shen; Déborah I Scheffer; Kelvin Y Kwan; David P Corey
Journal:  Database (Oxford)       Date:  2015-07-24       Impact factor: 3.451

5.  A general framework for estimating the relative pathogenicity of human genetic variants.

Authors:  Martin Kircher; Daniela M Witten; Preti Jain; Brian J O'Roak; Gregory M Cooper; Jay Shendure
Journal:  Nat Genet       Date:  2014-02-02       Impact factor: 38.330

6.  Bioinformatic Integration of Molecular Networks and Major Pathways Involved in Mice Cochlear and Vestibular Supporting Cells.

Authors:  Teresa Requena; Alvaro Gallego-Martinez; Jose A Lopez-Escamez
Journal:  Front Mol Neurosci       Date:  2018-04-05       Impact factor: 5.639

7.  SweGen: a whole-genome data resource of genetic variability in a cross-section of the Swedish population.

Authors:  Adam Ameur; Johan Dahlberg; Pall Olason; Francesco Vezzi; Robert Karlsson; Marcel Martin; Johan Viklund; Andreas Kusalananda Kähäri; Pär Lundin; Huiwen Che; Jessada Thutkawkorapin; Jesper Eisfeldt; Samuel Lampa; Mats Dahlberg; Jonas Hagberg; Niclas Jareborg; Ulrika Liljedahl; Inger Jonasson; Åsa Johansson; Lars Feuk; Joakim Lundeberg; Ann-Christine Syvänen; Sverker Lundin; Daniel Nilsson; Björn Nystedt; Patrik Ke Magnusson; Ulf Gyllensten
Journal:  Eur J Hum Genet       Date:  2017-08-23       Impact factor: 4.246

8.  Characterization of the development of the mouse cochlear epithelium at the single cell level.

Authors:  Likhitha Kolla; Michael C Kelly; Zoe F Mann; Alejandro Anaya-Rocha; Kathryn Ellis; Abigail Lemons; Adam T Palermo; Kathy S So; Joseph C Mays; Joshua Orvis; Joseph C Burns; Ronna Hertzano; Elizabeth C Driver; Matthew W Kelley
Journal:  Nat Commun       Date:  2020-05-13       Impact factor: 14.919

9.  ACMG recommendations for reporting of incidental findings in clinical exome and genome sequencing.

Authors:  Robert C Green; Jonathan S Berg; Wayne W Grody; Sarah S Kalia; Bruce R Korf; Christa L Martin; Amy L McGuire; Robert L Nussbaum; Julianne M O'Daniel; Kelly E Ormond; Heidi L Rehm; Michael S Watson; Marc S Williams; Leslie G Biesecker
Journal:  Genet Med       Date:  2013-06-20       Impact factor: 8.822

10.  Prevalence, associated factors, and comorbid conditions for Ménière's disease.

Authors:  Jessica S Tyrrell; David J D Whinney; Obioha C Ukoumunne; Lora E Fleming; Nicholas J Osborne
Journal:  Ear Hear       Date:  2014 Jul-Aug       Impact factor: 3.570

View more
  4 in total

1.  Transmembrane Transporter Sema3D Serves as a Tumor Suppressor in Localized Clear Cell Renal Cell Carcinoma.

Authors:  Ruiyang Xie; Jie Wu; Bingqing Shang; Chuanzhen Cao; Xingang Bi; Hongzhe Shi; Jianzhong Shou; Youyan Guan
Journal:  J Oncol       Date:  2022-06-30       Impact factor: 4.501

2.  Genetics of Hearing Impairment.

Authors:  Hannie Kremer; Ignacio Del Castillo
Journal:  Genes (Basel)       Date:  2022-05-11       Impact factor: 4.141

3.  Defective α-tectorin may involve tectorial membrane in familial Meniere disease.

Authors:  Pablo Roman-Naranjo; Alberto M Parra-Perez; Alba Escalera-Balsera; Andres Soto-Varela; Alvaro Gallego-Martinez; Ismael Aran; Nicolas Perez-Fernandez; David Bächinger; Andreas H Eckhard; Rocio Gonzalez-Aguado; Lidia Frejo; Jose A Lopez-Escamez
Journal:  Clin Transl Med       Date:  2022-06

4.  Case Report: Ménière's Disease-Like Symptoms in 22q11.2 Deletion Syndrome.

Authors:  Kwang-Dong Choi; Jeong-Yeon Kim; Seo-Young Choi; Eun Hye Oh; Hyun-Min Lee; Jieun Roh; Jae-Hwan Choi
Journal:  Front Neurol       Date:  2021-06-18       Impact factor: 4.003

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.