Literature DB >> 33255927

LAMP-LFD Based on Isothermal Amplification of Multicopy Gene ORF160b: Applicability for Highly Sensitive Low-Tech Screening of Allergenic Soybean (Glycine max) in Food.

Stefanie M Allgöwer1, Chris A Hartmann1, Clarissa Lipinski1, Vera Mahler1, Stefanie Randow1, Elke Völker1, Thomas Holzhauser1.   

Abstract

Soybean (Glycine max) allergy can be life threatening. A lack of causative immunotherapy of soybean allergy makes soybean avoidance indispensable. Detection methods are essential to verify allergen labeling and unintentional allergen cross contact during food manufacture. Here, we aimed at evaluating our previously described primers for loop-mediated isothermal amplification (LAMP) of multicopy gene ORF160b, combined with a lateral flow dipstick (LFD)-like detection, for their performance of soybean detection in complex food matrices. The results were compared with those obtained using quantitative real-time Polymerase Chain Reaction (qPCR) as the current standard of DNA-based allergen detection, and antibody-based commercial lateral flow device (LFD) as the current reference of protein-based rapid allergen detection. LAMP-LFD allowed unequivocal and reproducible detection of 10 mg/kg soybean incurred in three representative matrices (boiled sausage, chocolate, instant tomato soup), while clear visibility of positive test lines of two commercial LFD tests was between 10 and 102 mg/kg and depending on the matrix. Sensitivity of soybean detection in incurred food matrices, commercial retail samples, as well as various processed soybean products was comparable between LAMP-LFD and qPCR. The DNA-based LAMP-LFD proved to be a simple and low-technology soybean detection tool, showing sensitivity and specificity that is comparable or superior to the investigated commercial protein-based LFD.

Entities:  

Keywords:  Glycine max; allergen detection; food allergy; lateral flow dipstick/device (LFD); loop-mediated isothermal amplification (LAMP); multicopy gene; qPCR; rapid test; soybean

Year:  2020        PMID: 33255927      PMCID: PMC7760099          DOI: 10.3390/foods9121741

Source DB:  PubMed          Journal:  Foods        ISSN: 2304-8158


  27 in total

1.  Loop-mediated isothermal amplification of DNA.

Authors:  T Notomi; H Okayama; H Masubuchi; T Yonekawa; K Watanabe; N Amino; T Hase
Journal:  Nucleic Acids Res       Date:  2000-06-15       Impact factor: 16.971

2.  The MIQE guidelines: minimum information for publication of quantitative real-time PCR experiments.

Authors:  Stephen A Bustin; Vladimir Benes; Jeremy A Garson; Jan Hellemans; Jim Huggett; Mikael Kubista; Reinhold Mueller; Tania Nolan; Michael W Pfaffl; Gregory L Shipley; Jo Vandesompele; Carl T Wittwer
Journal:  Clin Chem       Date:  2009-02-26       Impact factor: 8.327

3.  Prevalence and distribution of sensitization to foods in the European Community Respiratory Health Survey: a EuroPrevall analysis.

Authors:  P Burney; C Summers; S Chinn; R Hooper; R van Ree; J Lidholm
Journal:  Allergy       Date:  2010-02-22       Impact factor: 13.146

Review 4.  Traditional soyfoods: processing and products.

Authors:  P Golbitz
Journal:  J Nutr       Date:  1995-03       Impact factor: 4.798

Review 5.  Are current analytical methods suitable to verify VITAL® 2.0/3.0 allergen reference doses for EU allergens in foods?

Authors:  Thomas Holzhauser; Philip Johnson; James P Hindley; Gavin O'Connor; Chun-Han Chan; Joana Costa; Christiane K Fæste; Barbara J Hirst; Francesca Lambertini; Michela Miani; Marie-Claude Robert; Martin Röder; Stefan Ronsmans; Zsuzsanna Bugyi; Sándor Tömösközi; Simon D Flanagan
Journal:  Food Chem Toxicol       Date:  2020-08-29       Impact factor: 6.023

6.  Loop-mediated isothermal amplification (LAMP)-based method for rapid mushroom species identification.

Authors:  Franziska Vaagt; Ilka Haase; Markus Fischer
Journal:  J Agric Food Chem       Date:  2013-02-12       Impact factor: 5.279

7.  Inhibition of PCR by components of food samples, microbial diagnostic assays and DNA-extraction solutions.

Authors:  L Rossen; P Nørskov; K Holmstrøm; O F Rasmussen
Journal:  Int J Food Microbiol       Date:  1992-09       Impact factor: 5.277

8.  Establishment of Reference Doses for residues of allergenic foods: report of the VITAL Expert Panel.

Authors:  Steve L Taylor; Joseph L Baumert; Astrid G Kruizinga; Benjamin C Remington; Rene W R Crevel; Simon Brooke-Taylor; Katrina J Allen; Geert Houben
Journal:  Food Chem Toxicol       Date:  2013-10-30       Impact factor: 6.023

9.  Colorimetric LAMP microfluidic chip for detecting three allergens: peanut, sesame and soybean.

Authors:  Dan Yuan; Jilie Kong; Xinxin Li; Xueen Fang; Qin Chen
Journal:  Sci Rep       Date:  2018-06-06       Impact factor: 4.379

10.  The Development of Highly Specific and Sensitive Primers for the Detection of Potentially Allergenic Soybean (Glycine max) Using Loop-Mediated Isothermal Amplification Combined with Lateral Flow Dipstick (LAMP-LFD).

Authors:  Stefanie M Allgöwer; Chris A Hartmann; Thomas Holzhauser
Journal:  Foods       Date:  2020-04-03
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  3 in total

1.  New Research in Food Allergen Detection.

Authors:  Rosario Linacero; Carmen Cuadrado
Journal:  Foods       Date:  2022-05-23

Review 2.  Loop-Mediated Isothermal Amplification Detection of SARS-CoV-2 and Myriad Other Applications.

Authors:  Keith J M Moore; Jeremy Cahill; Guy Aidelberg; Rachel Aronoff; Ali Bektaş; Daniela Bezdan; Daniel J Butler; Sridar V Chittur; Martin Codyre; Fernan Federici; Nathan A Tanner; Scott W Tighe; Randy True; Sarah B Ware; Anne L Wyllie; Evan E Afshin; Andres Bendesky; Connie B Chang; Richard Dela Rosa; Eran Elhaik; David Erickson; Andrew S Goldsborough; George Grills; Kathrin Hadasch; Andrew Hayden; Seong-Young Her; Julie A Karl; Chang Hee Kim; Alison J Kriegel; Thomas Kunstman; Zeph Landau; Kevin Land; Bradley W Langhorst; Ariel B Lindner; Benjamin E Mayer; Lee A McLaughlin; Matthew T McLaughlin; Jenny Molloy; Christopher Mozsary; Jerry L Nadler; Melinee D'Silva; David Ng; David H O'Connor; Jerry E Ongerth; Olayinka Osuolale; Ana Pinharanda; Dennis Plenker; Ravi Ranjan; Michael Rosbash; Assaf Rotem; Jacob Segarra; Stephan Schürer; Scott Sherrill-Mix; Helena Solo-Gabriele; Shaina To; Merly C Vogt; Albert D Yu; Christopher E Mason
Journal:  J Biomol Tech       Date:  2021-09

3.  Identification of a New Badnavirus in the Chinaberry (Melia azedarach) Tree and Establishment of a LAMP-LFD Assay for Its Rapid and Visual Detection.

Authors:  Huixin Lu; Jintian Tang; Kai Sun; Xiaoping Yu
Journal:  Viruses       Date:  2021-12-01       Impact factor: 5.048

  3 in total

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