Literature DB >> 33255806

Membrane-Mediated Lateral Interactions Regulate the Lifetime of Gramicidin Channels.

Oleg V Kondrashov1, Timur R Galimzyanov1, Rodion J Molotkovsky1, Oleg V Batishchev1, Sergey A Akimov1.   

Abstract

The lipid matrix of cellular membranes is an elastic liquid crystalline medium. Its deformations regulate the functionality and interactions of membrane proteins,f membrane-bound peptides, lipid and protein-lipid domains. Gramicidin A (gA) is a peptide, which incorporates into membrane leaflets as a monomer and may form a transmembrane dimer. In both configurations, gA deforms the membrane. The transmembrane dimer of gA is a cation-selective ion channel. Its electrical response strongly depends on the elastic properties of the membrane. The gA monomer and dimer deform the membrane differently; therefore, the elastic energy contributes to the activation barriers of the dimerization and dissociation of the conducting state. It is shown experimentally that channel characteristics alter if gA molecules have been located in the vicinity of the conducting dimer. Here, based on the theory of elasticity of lipid membranes, we developed a quantitative theoretical model which allows explaining experimentally observed phenomena under conditions of high surface density of gA or its analogues, i.e., in the regime of strong lateral interactions of gA molecules, mediated by elastic deformations of the membrane. The model would be useful for the analysis and prediction of the gA electrical response in various experimental conditions. This potentially widens the possible applications of gA as a convenient molecular sensor of membrane elasticity.

Entities:  

Keywords:  channel lifetime; elastic deformations; gramicidin; lateral dimer; lateral interactions; lipid membrane; protein-lipid interactions; theory of elasticity

Year:  2020        PMID: 33255806      PMCID: PMC7760706          DOI: 10.3390/membranes10120368

Source DB:  PubMed          Journal:  Membranes (Basel)        ISSN: 2077-0375


  43 in total

1.  Gramicidin channel controversy--the structure in a lipid environment.

Authors:  O S Andersen; H J Apell; E Bamberg; D D Busath; R E Koeppe; F J Sigworth; G Szabo; D W Urry; A Woolley
Journal:  Nat Struct Biol       Date:  1999-07

2.  Gaussian curvature elasticity determined from global shape transformations and local stress distributions: a comparative study using the MARTINI model.

Authors:  Mingyang Hu; Djurre H de Jong; Siewert J Marrink; Markus Deserno
Journal:  Faraday Discuss       Date:  2013       Impact factor: 4.008

3.  Strength of a bifurcated H bond.

Authors:  Esther S Feldblum; Isaiah T Arkin
Journal:  Proc Natl Acad Sci U S A       Date:  2014-03-03       Impact factor: 11.205

4.  Channel formation kinetics of gramicidin A in lipid bilayer membranes.

Authors:  E Bamberg; P Läuger
Journal:  J Membr Biol       Date:  1973       Impact factor: 1.843

5.  Measured effects of diacylglycerol on structural and elastic properties of phospholipid membranes.

Authors:  S Leikin; M M Kozlov; N L Fuller; R P Rand
Journal:  Biophys J       Date:  1996-11       Impact factor: 4.033

Review 6.  Lipid bilayer regulation of membrane protein function: gramicidin channels as molecular force probes.

Authors:  Jens A Lundbaek; Shemille A Collingwood; Helgi I Ingólfsson; Ruchi Kapoor; Olaf S Andersen
Journal:  J R Soc Interface       Date:  2009-11-25       Impact factor: 4.118

7.  Spring constants for channel-induced lipid bilayer deformations. Estimates using gramicidin channels.

Authors:  J A Lundbaek; O S Andersen
Journal:  Biophys J       Date:  1999-02       Impact factor: 4.033

8.  Membrane Elastic Deformations Modulate Gramicidin A Transbilayer Dimerization and Lateral Clustering.

Authors:  Oleg V Kondrashov; Timur R Galimzyanov; Konstantin V Pavlov; Elena A Kotova; Yuri N Antonenko; Sergey A Akimov
Journal:  Biophys J       Date:  2018-07-11       Impact factor: 4.033

View more
  4 in total

1.  Peptide-induced membrane elastic deformations decelerate gramicidin dimer-monomer equilibration.

Authors:  Oleg V Kondrashov; Tatyana I Rokitskaya; Oleg V Batishchev; Elena A Kotova; Yuri N Antonenko; Sergey A Akimov
Journal:  Biophys J       Date:  2021-10-27       Impact factor: 4.033

2.  Curvature-based sorting of eight lipid types in asymmetric buckled plasma membrane models.

Authors:  Elio A Cino; D Peter Tieleman
Journal:  Biophys J       Date:  2022-05-05       Impact factor: 3.699

3.  Regulation of Antimicrobial Peptide Activity via Tuning Deformation Fields by Membrane-Deforming Inclusions.

Authors:  Oleg V Kondrashov; Sergey A Akimov
Journal:  Int J Mol Sci       Date:  2021-12-28       Impact factor: 5.923

4.  Silicon Nitride-Based Micro-Apertures Coated with Parylene for the Investigation of Pore Proteins Fused in Free-Standing Lipid Bilayers.

Authors:  Tanzir Ahmed; Jayesh Arun Bafna; Roland Hemmler; Karsten Gall; Richard Wagner; Mathias Winterhalter; Michael J Vellekoop; Sander van den Driesche
Journal:  Membranes (Basel)       Date:  2022-03-09
  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.