Literature DB >> 34715080

Peptide-induced membrane elastic deformations decelerate gramicidin dimer-monomer equilibration.

Oleg V Kondrashov1, Tatyana I Rokitskaya2, Oleg V Batishchev1, Elena A Kotova2, Yuri N Antonenko3, Sergey A Akimov4.   

Abstract

Gramicidin A (gA) is a hydrophobic pentadecapeptide readily incorporating into a planar bilayer lipid membrane (BLM), thereby inducing a large macroscopic current across the BLM. This current results from ion-channel formation due to head-to-head transbilayer dimerization of gA monomers with rapidly established monomer-dimer equilibrium. Any disturbance of the equilibrium, e.g., by sensitized photoinactivation of a portion of gA monomers, causes relaxation toward a new equilibrium state. According to previous studies, the characteristic relaxation time of the gA-mediated electric current decreases as the current increases upon elevating the gA concentration in the membrane. Here, we report data on the current relaxation kinetics for gA analogs with N-terminal valine replaced by glycine or tyrosine. Surprisingly, the relaxation time increased rather than decreased upon elevation of the total membrane conductance induced by these gA analogs, thus contradicting the classical kinetic scheme. We developed a general theoretical model that accounts for lateral interaction of monomers and dimers mediated by membrane elastic deformations. The modified kinetic scheme of the gramicidin dimerization predicts the reverse dependence of the relaxation time on membrane conductance for gA analogs, with a decreased dimerization constant that is in a good agreement with our experimental data. The equilibration process may be also modulated by incorporation of other peptides ("impurities") into the lipid membrane.
Copyright © 2021 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2021        PMID: 34715080      PMCID: PMC8715175          DOI: 10.1016/j.bpj.2021.10.030

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  65 in total

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Authors:  H D Arndt; A Knoll; U Koert
Journal:  Chembiochem       Date:  2001-03-02       Impact factor: 3.164

2.  Gaussian curvature elasticity determined from global shape transformations and local stress distributions: a comparative study using the MARTINI model.

Authors:  Mingyang Hu; Djurre H de Jong; Siewert J Marrink; Markus Deserno
Journal:  Faraday Discuss       Date:  2013       Impact factor: 4.008

3.  Role of mitochondrial outer membrane in the uncoupling activity of N-terminally glutamate-substituted gramicidin A.

Authors:  Ljudmila S Khailova; Tatyana I Rokitskaya; Sergey I Kovalchuk; Еlena А Kotova; Alexandra I Sorochkina; Yuri N Antonenko
Journal:  Biochim Biophys Acta Biomembr       Date:  2018-06-22       Impact factor: 3.747

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5.  Frequency-Based Analysis of Gramicidin A Nanopores Enabling Detection of Small Molecules with Picomolar Sensitivity.

Authors:  Young Hun Kim; Leibniz Hang; Jessica L Cifelli; David Sept; Michael Mayer; Jerry Yang
Journal:  Anal Chem       Date:  2018-01-16       Impact factor: 6.986

6.  Mechanism of Initial Stage of Pore Formation Induced by Antimicrobial Peptide Magainin 2.

Authors:  Moynul Hasan; Mohammad Abu Sayem Karal; Victor Levadnyy; Masahito Yamazaki
Journal:  Langmuir       Date:  2018-02-27       Impact factor: 3.882

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Authors:  T I Rokitskaya; Y N Antonenko; E A Kotova
Journal:  FEBS Lett       Date:  1993-08-30       Impact factor: 4.124

8.  Intrinsic lipid curvatures of mammalian plasma membrane outer leaflet lipids and ceramides.

Authors:  Michael Kaltenegger; Johannes Kremser; Moritz P K Frewein; Primož Ziherl; Douwe J Bonthuis; Georg Pabst
Journal:  Biochim Biophys Acta Biomembr       Date:  2021-07-29       Impact factor: 3.747

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Journal:  Biophys J       Date:  1999-02       Impact factor: 4.033

10.  Asymmetric gramicidin channels: heterodimeric channels with a single F6Val1 residue.

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Journal:  Biophys J       Date:  1994-06       Impact factor: 4.033

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  2 in total

1.  Regulation of Antimicrobial Peptide Activity via Tuning Deformation Fields by Membrane-Deforming Inclusions.

Authors:  Oleg V Kondrashov; Sergey A Akimov
Journal:  Int J Mol Sci       Date:  2021-12-28       Impact factor: 5.923

2.  Hydrophobic Mismatch Controls the Mode of Membrane-Mediated Interactions of Transmembrane Peptides.

Authors:  Oleg V Kondrashov; Peter I Kuzmin; Sergey A Akimov
Journal:  Membranes (Basel)       Date:  2022-01-13
  2 in total

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