Literature DB >> 33255364

Multi-Gene Next-Generation Sequencing for Molecular Diagnosis of Autosomal Recessive Congenital Ichthyosis: A Genotype-Phenotype Study of Four Italian Patients.

Tiziana Fioretti1, Luigi Auricchio2, Angelo Piccirillo3, Giuseppina Vitiello4, Adelaide Ambrosio5, Fabio Cattaneo5, Rosario Ammendola5, Gabriella Esposito1,5.   

Abstract

Autosomal recessive congenital ichthyoses (ARCI) are rare genodermatosis disorders characterized by phenotypic and genetic heterogeneity. At least fourteen genes so far have been related to ARCI; however, despite genetic heterogeneity, phenotypes associated with mutation of different ARCI genes may overlap, thereby making difficult their clinical and molecular classification. In addition, molecular tests for diagnosis of such an extremely rare heterogeneous inherited disease are not easily available in clinical settings. In the attempt of identifying the genetic cause of the disease in four Italian patients with ARCI, we performed next-generation sequencing (NGS) analysis targeting 4811 genes that have been previously linked to human genetic diseases; we focused our analysis on the 13 known ARCI genes comprised in the panel. Nine different variants including three novel small nucleotide changes and two novel large deletions have been identified and validated in the ABCA12, ALOX12B, CYP4F22, and SULT2B1 genes. Notably, two patients had variants in more than one gene. The identification and validation of new pathogenic ABCA12, ALOX12B, CYP4F22, and SULT2B1 variants through multi-gene NGS in four cases of ARCI further highlight the importance of these genes in proper skin function and development.

Entities:  

Keywords:  congenital ichthyosiform erythroderma; genotype-phenotype correlation; large deletion; next generation sequencing; nonsyndromic autosomal recessive ichthyosis

Year:  2020        PMID: 33255364      PMCID: PMC7760754          DOI: 10.3390/diagnostics10120995

Source DB:  PubMed          Journal:  Diagnostics (Basel)        ISSN: 2075-4418


  42 in total

1.  Apparent homozygosity due to compound heterozygosity of one point mutation and an overlapping exon deletion mutation in ABCA12: A genetic diagnostic pitfall.

Authors:  Akitaka Shibata; Kazumitsu Sugiura; Atsushi Suzuki; Takashi Ichiki; Masashi Akiyama
Journal:  J Dermatol Sci       Date:  2015-10-08       Impact factor: 4.563

2.  HGVS Recommendations for the Description of Sequence Variants: 2016 Update.

Authors:  Johan T den Dunnen; Raymond Dalgleish; Donna R Maglott; Reece K Hart; Marc S Greenblatt; Jean McGowan-Jordan; Anne-Francoise Roux; Timothy Smith; Stylianos E Antonarakis; Peter E M Taschner
Journal:  Hum Mutat       Date:  2016-03-25       Impact factor: 4.878

Review 3.  Toward Clinical Implementation of Next-Generation Sequencing-Based Genetic Testing in Rare Diseases: Where Are We?

Authors:  Zhichao Liu; Liyuan Zhu; Ruth Roberts; Weida Tong
Journal:  Trends Genet       Date:  2019-10-14       Impact factor: 11.639

4.  Burden of inherited ichthyosis: a French national survey.

Authors:  Isabelle Dreyfus; Céline Pauwels; Emmanuelle Bourrat; Anne-Claire Bursztejn; Annabel Maruani; Christine Chiaverini; Aude Maza; Stéphanie Mallet; Didier Bessis; Sébastien Barbarot; Khaled Ezzedine; Pierre Vabres; Juliette Mazereeuw-Hautier
Journal:  Acta Derm Venereol       Date:  2015-03       Impact factor: 4.437

5.  Photoletter to the editor: Lamellar ichthyosis and arthrogryposis in a premature neonate.

Authors:  Chiara De Leonibus; Claudio Lembo; Alfredo Santantonio; Tiziana Fioretti; Silvana Rojo; Francesco Salvatore; Massimiliano De Vivo; Gabriella Esposito; Paolo Giliberti
Journal:  J Dermatol Case Rep       Date:  2015-06-30

6.  Ichthyoses in everyday practice: management of a rare group of diseases.

Authors:  Kira Süßmuth; Heiko Traupe; Dieter Metze; Vinzenz Oji
Journal:  J Dtsch Dermatol Ges       Date:  2020-03-02       Impact factor: 5.584

7.  Prenatal molecular diagnosis of inherited neuromuscular diseases: Duchenne/Becker muscular dystrophy, myotonic dystrophy type 1 and spinal muscular atrophy.

Authors:  Gabriella Esposito; Raffaella Ruggiero; Maria Savarese; Giovanni Savarese; Maria Roberta Tremolaterra; Francesco Salvatore; Antonella Carsana
Journal:  Clin Chem Lab Med       Date:  2013-12       Impact factor: 3.694

8.  Genotype-phenotype correlation in a large English cohort of patients with autosomal recessive ichthyosis.

Authors:  J K Simpson; M Martinez-Queipo; A Onoufriadis; S Tso; E Glass; L Liu; T Higashino; W Scott; C Tierney; M A Simpson; R Desomchoke; L Youssefian; A H SaeIdian; H Vahidnezhad; A Bisquera; J Ravenscroft; C Moss; E A O'Toole; N Burrows; S Leech; E A Jones; D Lim; A Ilchyshyn; N Goldstraw; M J Cork; S Darne; J Uitto; A E Martinez; J E Mellerio; J A McGrath
Journal:  Br J Dermatol       Date:  2019-08-26       Impact factor: 9.302

Review 9.  Molecular Genetics of Keratinization Disorders - What's New About Ichthyosis.

Authors:  Jouni Uitto; Leila Youssefian; Amir Hossein Saeidian; Hassan Vahidnezhad
Journal:  Acta Derm Venereol       Date:  2020-03-25       Impact factor: 3.875

Review 10.  Genome sequencing and implications for rare disorders.

Authors:  Jennifer E Posey
Journal:  Orphanet J Rare Dis       Date:  2019-06-24       Impact factor: 4.123

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  5 in total

1.  Comprehensive Molecular Analysis of DMD Gene Increases the Diagnostic Value of Dystrophinopathies: A Pilot Study in a Southern Italy Cohort of Patients.

Authors:  Fatima Domenica Elisa De Palma; Marcella Nunziato; Valeria D'Argenio; Maria Savarese; Gabriella Esposito; Francesco Salvatore
Journal:  Diagnostics (Basel)       Date:  2021-10-15

Review 2.  Current Strategies for the Gene Therapy of Autosomal Recessive Congenital Ichthyosis and Other Types of Inherited Ichthyosis.

Authors:  Daria S Chulpanova; Alisa A Shaimardanova; Aleksei S Ponomarev; Somaia Elsheikh; Albert A Rizvanov; Valeriya V Solovyeva
Journal:  Int J Mol Sci       Date:  2022-02-24       Impact factor: 5.923

3.  Novel mutations of the ABCA12, KRT1 and ST14 genes in three unrelated newborns showing congenital ichthyosis.

Authors:  Gregorio Serra; Luigi Memo; Paola Cavicchioli; Mario Cutrone; Mario Giuffrè; Maria Laura La Torre; Ingrid Anne Mandy Schierz; Giovanni Corsello
Journal:  Ital J Pediatr       Date:  2022-08-13       Impact factor: 3.288

4.  Identification of the first congenital ichthyosis case caused by a homozygous deletion in the ALOX12B gene due to chromosome 17 mixed uniparental disomy.

Authors:  Lei Zhang; Yanqiu Hu; Jingjing Lu; Peiwei Zhao; Xiankai Zhang; Li Tan; Jun Li; Cuiping Xiao; Linkong Zeng; Xuelian He
Journal:  Front Genet       Date:  2022-08-08       Impact factor: 4.772

5.  Novel Homozygous Mutations in the Genes TGM1, SULT2B1, SPINK5 and FLG in Four Families Underlying Congenital Ichthyosis.

Authors:  Fozia Fozia; Rubina Nazli; Sher Alam Khan; Ahmed Bari; Abdul Nasir; Riaz Ullah; Hafiz Majid Mahmood; Muhammad Sohaib; Abdulrahman Alobaid; Siddique A Ansari; Sulman Basit; Saadullah Khan
Journal:  Genes (Basel)       Date:  2021-03-05       Impact factor: 4.096

  5 in total

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