Literature DB >> 33242727

Single-molecule microscopy for in-cell quantification of protein oligomeric stoichiometry.

Huanhuan Chen1, Xihong Xie1, Tai-Yen Chen2.   

Abstract

Protein organization modification plays a vital role in initiating signaling pathways, transcriptional regulation, and cell apoptosis regulation. Simultaneous quantification of oligomeric state and cellular parameters in the same cell, even though challenging, is required to understand their correlation at the molecular level. Recent advances of fluorescence protein and single-molecule localization microscopy enables the determination of localizations and oligomeric states of target proteins in cells. We reviewed the fluorescence intensity-based, localization-based, and photophysical property-based approaches for in-cell quantification of protein oligomeric stoichiometry. We discussed their working principles, applications, advantages, and limitations. These results also imply the combination of methodologies targeting different biological parameters at the single-cell level is essential to uncover the structure-function relationship at the molecular level.
Copyright © 2020 Elsevier Ltd. All rights reserved.

Entities:  

Mesh:

Substances:

Year:  2020        PMID: 33242727      PMCID: PMC7965257          DOI: 10.1016/j.sbi.2020.10.022

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  49 in total

1.  Fluorescence cross-correlation spectroscopy in living cells.

Authors:  Kirsten Bacia; Sally A Kim; Petra Schwille
Journal:  Nat Methods       Date:  2006-02       Impact factor: 28.547

2.  A general method to quantify ligand-driven oligomerization from fluorescence-based images.

Authors:  Michael R Stoneman; Gabriel Biener; Richard J Ward; John D Pediani; Dammar Badu; Annie Eis; Ionel Popa; Graeme Milligan; Valerică Raicu
Journal:  Nat Methods       Date:  2019-05-20       Impact factor: 28.547

3.  Adaptor protein mediates dynamic pump assembly for bacterial metal efflux.

Authors:  Ace George Santiago; Tai-Yen Chen; Lauren A Genova; Won Jung; Alayna M George Thompson; Megan M McEvoy; Peng Chen
Journal:  Proc Natl Acad Sci U S A       Date:  2017-06-12       Impact factor: 11.205

4.  Oligomeric organization of the B-cell antigen receptor on resting cells.

Authors:  Jianying Yang; Michael Reth
Journal:  Nature       Date:  2010-09-05       Impact factor: 49.962

5.  Green fluorescent protein as a marker for gene expression.

Authors:  M Chalfie; Y Tu; G Euskirchen; W W Ward; D C Prasher
Journal:  Science       Date:  1994-02-11       Impact factor: 47.728

Review 6.  Visualizing and discovering cellular structures with super-resolution microscopy.

Authors:  Yaron M Sigal; Ruobo Zhou; Xiaowei Zhuang
Journal:  Science       Date:  2018-08-30       Impact factor: 47.728

7.  One, two or three? Probing the stoichiometry of membrane proteins by single-molecule localization microscopy.

Authors:  Franziska Fricke; Joel Beaudouin; Roland Eils; Mike Heilemann
Journal:  Sci Rep       Date:  2015-09-11       Impact factor: 4.379

8.  Dynamic tuneable G protein-coupled receptor monomer-dimer populations.

Authors:  Patricia M Dijkman; Oliver K Castell; Alan D Goddard; Juan C Munoz-Garcia; Chris de Graaf; Mark I Wallace; Anthony Watts
Journal:  Nat Commun       Date:  2018-04-27       Impact factor: 14.919

9.  Imaging of fluorescence anisotropy during photoswitching provides a simple readout for protein self-association.

Authors:  Namrata Ojha; Kristin H Rainey; George H Patterson
Journal:  Nat Commun       Date:  2020-01-07       Impact factor: 14.919

10.  Single-molecule imaging reveals molecular coupling between transcription and DNA repair machinery in live cells.

Authors:  Han Ngoc Ho; Antoine M van Oijen; Harshad Ghodke
Journal:  Nat Commun       Date:  2020-03-20       Impact factor: 14.919

View more
  1 in total

Review 1.  Crossroads between membrane trafficking machinery and copper homeostasis in the nerve system.

Authors:  Meng-Hsuan Wen; Xihong Xie; Pei-San Huang; Karen Yang; Tai-Yen Chen
Journal:  Open Biol       Date:  2021-12-01       Impact factor: 6.411

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.