Literature DB >> 31110281

A general method to quantify ligand-driven oligomerization from fluorescence-based images.

Michael R Stoneman1, Gabriel Biener1, Richard J Ward2, John D Pediani2, Dammar Badu1, Annie Eis1, Ionel Popa1, Graeme Milligan2, Valerică Raicu3,4.   

Abstract

Here, we introduce fluorescence intensity fluctuation spectrometry for determining the identity, abundance and stability of protein oligomers. This approach was tested on monomers and oligomers of known sizes and was used to uncover the oligomeric states of the epidermal growth factor receptor and the secretin receptor in the presence and absence of their agonist ligands. This method is fast and is scalable for high-throughput screening of drugs targeting protein-protein interactions.

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Year:  2019        PMID: 31110281     DOI: 10.1038/s41592-019-0408-9

Source DB:  PubMed          Journal:  Nat Methods        ISSN: 1548-7091            Impact factor:   28.547


  20 in total

Review 1.  Membrane receptor activation mechanisms and transmembrane peptide tools to elucidate them.

Authors:  Justin M Westerfield; Francisco N Barrera
Journal:  J Biol Chem       Date:  2019-12-25       Impact factor: 5.157

2.  EGFR forms ligand-independent oligomers that are distinct from the active state.

Authors:  Patrick O Byrne; Kalina Hristova; Daniel J Leahy
Journal:  J Biol Chem       Date:  2020-07-29       Impact factor: 5.157

3.  Quantitative Super-Resolution Imaging for the Analysis of GPCR Oligomerization.

Authors:  Megan D Joseph; Elena Tomas Bort; Richard P Grose; Peter J McCormick; Sabrina Simoncelli
Journal:  Biomolecules       Date:  2021-10-12

Review 4.  The transition model of RTK activation: A quantitative framework for understanding RTK signaling and RTK modulator activity.

Authors:  Michael D Paul; Kalina Hristova
Journal:  Cytokine Growth Factor Rev       Date:  2019-11-01       Impact factor: 7.638

5.  Probing Membrane Protein Association Using Concentration-Dependent Number and Brightness.

Authors:  Michael D Paul; Randall Rainwater; Yi Zuo; Luo Gu; Kalina Hristova
Journal:  Angew Chem Int Ed Engl       Date:  2021-02-04       Impact factor: 15.336

Review 6.  Single-molecule microscopy for in-cell quantification of protein oligomeric stoichiometry.

Authors:  Huanhuan Chen; Xihong Xie; Tai-Yen Chen
Journal:  Curr Opin Struct Biol       Date:  2020-11-23       Impact factor: 6.809

7.  The Biased Ligands NGF and NT-3 Differentially Stabilize Trk-A Dimers.

Authors:  Fozia Ahmed; Elmer Zapata-Mercado; Sanim Rahman; Kalina Hristova
Journal:  Biophys J       Date:  2020-12-05       Impact factor: 4.033

8.  Fluorescence intensity fluctuation analysis of receptor oligomerization in membrane domains.

Authors:  Gabriel Biener; Michael R Stoneman; Valerică Raicu
Journal:  Biophys J       Date:  2021-06-30       Impact factor: 3.699

9.  Quantitative characterization of tetraspanin 8 homointeractions in the plasma membrane.

Authors:  Daniel Wirth; Ece Özdemir; Christopher King; Lena Ahlswede; Dirk Schneider; Kalina Hristova
Journal:  Biochem J       Date:  2021-10-15       Impact factor: 3.766

Review 10.  Ligand bias in receptor tyrosine kinase signaling.

Authors:  Kelly Karl; Michael D Paul; Elena B Pasquale; Kalina Hristova
Journal:  J Biol Chem       Date:  2020-10-29       Impact factor: 5.157

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