Literature DB >> 33220619

Rapid generation of inoculum of a plant RNA virus using overlap PCR.

Phu-Tri Tran1, Chao Feng Zhang2, Vitaly Citovsky2.   

Abstract

We have developed an efficient method to rapidly generate infectious inoculum of a plant RNA virus and confirmed its infectivity by mechanical inoculation. The method takes advantage of overlap PCR to bypass the cloning steps, which makes it relatively simple, rapid, and inexpensive compared to the traditional methods. Using this approach, inoculum of a tobamovirus, Turnip vein clearing virus (TVCV), was generated. PCR products specific for the 35S promoter and TVCV genome were used as templates for overlap PCR to form a single product containing the full-length TVCV cDNA under the control of the double 35S promoter, and the entire process took only 8 h. This inoculum was infectious in Nicotiana benthamiana, and its infectivity was ca. 67% compared to 0% and 100% with negative and positive controls, respectively. Thus, this rapid method generates efficient infectious inoculum for a plant RNA virus.
Copyright © 2020 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Inoculum; Overlap PCR; TVCV

Mesh:

Substances:

Year:  2020        PMID: 33220619      PMCID: PMC8041095          DOI: 10.1016/j.virol.2020.11.001

Source DB:  PubMed          Journal:  Virology        ISSN: 0042-6822            Impact factor:   3.616


  14 in total

1.  High fidelity of yellow fever virus RNA polymerase.

Authors:  Konstantin V Pugachev; Farshad Guirakhoo; Simeon W Ocran; Fred Mitchell; Megan Parsons; Caroline Penal; Soheila Girakhoo; Svetlana O Pougatcheva; Juan Arroyo; Dennis W Trent; Thomas P Monath
Journal:  J Virol       Date:  2004-01       Impact factor: 5.103

2.  A plant intron enhances the performance of an infectious clone in planta.

Authors:  Phu-Tri Tran; Miao Fang; Kristin Widyasari; Kook-Hyung Kim
Journal:  J Virol Methods       Date:  2018-12-19       Impact factor: 2.014

3.  Delivery and expression of functional viral RNA genomes in planta by agroinfiltration.

Authors:  Padmanaban Annamalai; A L N Rao
Journal:  Curr Protoc Microbiol       Date:  2006-06

4.  Synaptotagmin SYTA forms ER-plasma membrane junctions that are recruited to plasmodesmata for plant virus movement.

Authors:  Amit Levy; Judy Y Zheng; Sondra G Lazarowitz
Journal:  Curr Biol       Date:  2015-07-09       Impact factor: 10.834

5.  Heterologous sequences greatly affect foreign gene expression in tobacco mosaic virus-based vectors.

Authors:  S Shivprasad; G P Pogue; D J Lewandowski; J Hidalgo; J Donson; L K Grill; W O Dawson
Journal:  Virology       Date:  1999-03-15       Impact factor: 3.616

6.  Tobacco mosaic virus infection spreads cell to cell as intact replication complexes.

Authors:  Shigeki Kawakami; Yuichiro Watanabe; Roger N Beachy
Journal:  Proc Natl Acad Sci U S A       Date:  2004-04-12       Impact factor: 11.205

7.  Identification of the subgenomic promoter of the coat protein gene of cucumber fruit mottle mosaic virus and development of a heterologous expression vector.

Authors:  Sun-Ju Rhee; Yoon Jeong Jang; Gung Pyo Lee
Journal:  Arch Virol       Date:  2016-03-15       Impact factor: 2.574

8.  Systemic gene delivery into soybean by simple rub-inoculation with plasmid DNA of a Soybean mosaic virus-based vector.

Authors:  Jang-Kyun Seo; Hyeok-Geun Lee; Kook-Hyung Kim
Journal:  Arch Virol       Date:  2008-12-19       Impact factor: 2.574

9.  Examining Sources of Error in PCR by Single-Molecule Sequencing.

Authors:  Vladimir Potapov; Jennifer L Ong
Journal:  PLoS One       Date:  2017-01-06       Impact factor: 3.240

10.  The landscape of transcription errors in eukaryotic cells.

Authors:  Jean-Francois Gout; Weiyi Li; Clark Fritsch; Annie Li; Suraiya Haroon; Larry Singh; Ding Hua; Hossein Fazelinia; Zach Smith; Steven Seeholzer; Kelley Thomas; Michael Lynch; Marc Vermulst
Journal:  Sci Adv       Date:  2017-10-20       Impact factor: 14.136

View more
  1 in total

1.  Wristwatch PCR: A Versatile and Efficient Genome Walking Strategy.

Authors:  Lingqin Wang; Mengya Jia; Zhaoqin Li; Xiaohua Liu; Tianyi Sun; Jinfeng Pei; Cheng Wei; Zhiyu Lin; Haixing Li
Journal:  Front Bioeng Biotechnol       Date:  2022-04-12
  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.