| Literature DB >> 33219491 |
Jonathan London1, David Boutboul2,3, Karine Lacombe4, France Pirenne5, Beate Heym6, Valérie Zeller7, Antoine Baudet8, Amani Ouedrani9,10, Alice Bérezné8.
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Year: 2020 PMID: 33219491 PMCID: PMC7678568 DOI: 10.1007/s10875-020-00904-5
Source DB: PubMed Journal: J Clin Immunol ISSN: 0271-9142 Impact factor: 8.317
Characteristics of immunodeficiency at diagnosis and of COVID-19 viral shedding
| Patient 1 | Patient 2 | |
|---|---|---|
| Characteristics of ID at diagnosis | ||
| Serum immunoglobulin | ||
| IgG, g/L | 3.79 | 1.86 |
| IgA, g/L | 0.27 | < 0.1 |
| IgM, g/L | 0.18 | < 0.1 |
| Lymphocyte phenotyping (date) | Day 71 | 04/2016 |
| Lymphocyte, /mm3 | 1625 | 2400 |
| T cell CD3+, /mm3 (%) | 1571 (97) | 1700 (70) |
| CD4 T cell CD3 + CD4+, /mm3 (%) | 700 (43) | 1200 (50) |
| Naive | 54% | 49% |
| Central memory | 28% | 19% |
| Transitional CD45-CCR7-CD27+/CD3 + CD4+ | 6% | NA |
| Effector | 11% | 32% |
| TEMRA | 1% | NA |
| CD8 T cell CD3 + CD8+, /mm3 (%) | 720 (44) | 400 (17) |
| Naive | 27% | 46% |
| Central memory | 3% | 5% |
| Transitional | 20% | NA |
| Effector | 17% | 50% |
| TEMRA | 20% | 30% |
| CD56+CD16+, /mm3 (%) | 50 (3) | 504 (21) |
| CD19+, /mm3 (%) | 0 (0) | 5 (0.2) |
| CD20+, /mm3 (%) | 0 (0) | 5 (0.2) |
| Mitogen-stimulated T cell proliferation | ||
| Response to PHA stimulation | Normal | NA |
| SARS-CoV-2-specific T cell response evaluated by ELISPOT | ||
| S1, SFC/million CD3+ | 893 | NA |
| S2, SFC/million CD3+ | 383 | NA |
| M, SFC/million CD3+ | 1733 | NA |
| N, SFC/million CD3+ | 1883 | NA |
| Positive controls | ||
| CEFX Ultra SuperStim pool (JPT), SFC/million CD3+ | TNTC | NA |
| PHA, SFC/million CD3+ | TNTC | NA |
| Characteristics of COVID-19 viral shedding | ||
| Elapsed time (in days) since first COVID-19 symptoms and | ||
| First positive SARS-CoV2 PCR in nasopharyngeal swab | 17 (Ct = 31) | 5 (Ct = 25) |
| First positive serum SARS-CoV2 PCR | 64 (Ct = 38) | NA |
| Last positive SARS-CoV2 PCR in nasopharyngeal swab | 61 (Ct = 39) | NA |
| Positive SARS-CoV2 PCR in BAL | 64 (Ct = 35) | 32 (Ct = 23) |
| First negative SARS-CoV2 PCR in nasopharyngeal swab | 78 | Last PCR still positive |
| First negative serum SARS-CoV2 PCR | 78 | NA |
ID, immunodeficiency; BAL, bronchoalveolar lavage; Ct, cycle threshold; NA, not available; ELISPOT, enzyme linked immunoSpot; S1, spike protein peptide pool 1; S2, spike protein peptide pool 2; M, membrane protein; N, nucleoprotein; PHA, phytohaemagglutinine; TNTC, too numerous to count
Characteristics of immunodeficiency at diagnosis and of COVID-19 viral shedding
| Study | London et al. | Quinti et al. | Fill et al. | Soresina et al. | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Patient number | 1 | 2 | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 1 | 1 | 2 |
| Age | 41 | 65 | 56 | 34 | 59 | 32 | 57 | 52 | 41 | 53 | 34 | 26 |
| Sex | F | M | M | M | F | F | M | M | M | F | M | M |
| Comorbidities | None | None | CRD | CRD | CRD | None | CRD, HT, OB | CRD | CRD, cancer, Sjögren | None | None | |
| Lymphocyte phenotyping (date) | Day 71 | 04/2016 | 01/2020 | 11/2019 | 01/2020 | 01/2020 | 10/2019 | 12/2019 | 09/2019 | NA | 03/2020 | 03/2020 |
| Lymphocyte, /mm3 | 1625 | 2400 | 1300 | 1700 | 1600 | 2050 | 3400 | 890 | 1800 | normal | NA | NA |
| CD3+CD4+, /mm3 (%) | 700 (43) | 1200 (50) | 460 | 900 | 672 | 950 | 2767 | 274 | 800 | NA | 495 (42) | 849 (45) |
| CD3+CD8+, /mm3 (%) | 720 (44) | 400 (17) | 739 | 700 | 338 | 850 | 1658 | 258 | 700 | NA | 509 (43) | 578 (31) |
| CD56+CD16+, /mm3 (%) | 50 (3) | 504 (21) | 25 | 28 | 46 | 30 | 21 | 85 | 15 | NA | NA (11) | NA (5.3) |
| CD19+ | 0 (0) | 5 (0.2) | 0 | 0 | 400 | 200 | 96 | 55 | 278 | NA | 0 | 0 |
| Immunodeficiency | Good | CVID | ARA | XLA | CVID | CVID | CVID | CVID | CVID | CVID | XLA | XLA |
| Genetic background | NA | Neg for | Neg for | NA | NA | NA | NA | NA | NA | |||
| COVID-19 clinical symptoms | F, H, Dy, Di, AP, Ag, An | F, C, As | None | F | F, Dy | F, Dy, C | F, Dy | F, Dy | F, Dy, C, My | F, My, H, C, CP, Dy, As | F, C | Ag, Vo, As, F |
| Maximum 02 requirement | 15 L/min | MV | 0 | 0 | MV | 4 L/min | MV | 0 | MV | MV | 0 | 0 |
| Device for O2 delivery | CPAP | MV | None | None | MV | Mask | MV | None | MV | MV | NA | NA |
| ICU | No | Yes | No | No | Yes | No | Yes | No | Yes | Yes | No | No |
| COVID-19 WHO clinical progression scale (0–10) | 6 | 10 | 1 | 4 | 10 | 5 | 7–9* | 4 | 7–9* | 7–9* | 4 | 4 |
| COVID-19 specific treatment | HCQ, CS, ATB, CCPT | Lo/Ri, ATB | HCQ, AZM, Da/Co | HCQ, ATB, Lo/Ri | HCQ, AZM, TCZ | HCQ, Da/Ri, TCZ | HCQ, Lo/Ri, Rem, CS | HCQ, AZM, Lo/Ri | HCQ, ATB, Lo/Ri, TCZ, Rem | HCQ, ATB, | Lo/Ri, HCQ, | HCQ, AZM, ATB |
| Duration of symptoms until recovery or death, days | 75 | 40 | 0 | 14 | 20 | 16 | 25 | 21 | 19 | 21 | 22 | NA |
| Maximum CRP, mg/L | 307 | 126 | 1 | 26 | NA | 7.5 | 120 | NA | 315 | 17 | 78 | 4 |
| Outcome | Recov | Death | Recov | Recov | Death | Recov | Recov | Recov | Recov | Recov | Recov | Recov |
ARA autosomal recessive agammaglobulinemia, XLA X-linked agammaglobulinemia, CVID common variable immunodeficiency, OB, obesity, HT hypertension, CRD, chronic respiratory disease, My myalgia, F fever, Dy dyspnea, Di diarrhea, H headache, AP abdominal pain, Ag ageusia, An anosmia, C cough, CPAP continuous positive airway pressure, HCQ hydroxychloroquine, ATB antibiotics, CCPT convalescent plasma treatment, Lo/Ri lopinavir/ritonavir, AZM azithromycin, Da/Ri darunavir/ritonavir, TCZ tocilizumab, Da/Co darunavir/cobicistat, RemNA not available, Neg negative, MV mechanical ventilation, Recov recovery
*Score between 7 and 9