Literature DB >> 33216938

Correlation of organelle dynamics between light microscopic live imaging and electron microscopic 3D architecture using FIB-SEM.

Keisuke Ohta1,2, Shingo Hirashima2, Yoshihiro Miyazono2, Akinobu Togo1, Kei-Ichiro Nakamura2.   

Abstract

Correlative light and electron microscopy (CLEM) methods combined with live imaging can be applied to understand the dynamics of organelles. Although recent advances in cell biology and light microscopy have helped in visualizing the details of organelle activities, observing their ultrastructure or organization of surrounding microenvironments is a challenging task. Therefore, CLEM, which allows us to observe the same area as an optical microscope with an electron microscope, has become a key technique in cell biology. Unfortunately, most CLEM methods have technical drawbacks, and many researchers face difficulties in applying CLEM methods. Here, we propose a live three-dimensional CLEM method, combined with a three-dimensional reconstruction technique using focused ion beam scanning electron microscopy tomography, as a solution to such technical barriers. We review our method, the associated technical limitations and the options considered to perform live CLEM.
© The Author(s) 2020. Published by Oxford University Press on behalf of The Japanese Society of Microscopy.

Entities:  

Keywords:  CLEM; dynamics; focused ion beam; fragmentation; live imaging; mitochondria

Year:  2021        PMID: 33216938      PMCID: PMC7989057          DOI: 10.1093/jmicro/dfaa071

Source DB:  PubMed          Journal:  Microscopy (Oxf)        ISSN: 2050-5698            Impact factor:   1.571


  38 in total

1.  Removal of glass coverslips from cultures flat embedded in epoxy resins using hydrofluoric acid.

Authors:  M J Moore
Journal:  J Microsc       Date:  1975-07       Impact factor: 1.758

2.  Visualization of identified GFP-expressing cells by light and electron microscopy.

Authors:  Katherine Luby-Phelps; Gang Ning; Joseph Fogerty; Joseph C Besharse
Journal:  J Histochem Cytochem       Date:  2003-03       Impact factor: 2.479

3.  Induction of asymmetrical cell division to analyze spindle-dependent organelle partitioning using correlative microscopy techniques.

Authors:  Jen-Hsuan Wei; Joachim Seemann
Journal:  Nat Protoc       Date:  2009-10-22       Impact factor: 13.491

4.  Mitochondrial oxidative stress causes mitochondrial fragmentation via differential modulation of mitochondrial fission-fusion proteins.

Authors:  Shengnan Wu; Feifan Zhou; Zhenzhen Zhang; Da Xing
Journal:  FEBS J       Date:  2011-02-03       Impact factor: 5.542

5.  The role of dynamin-related protein 1, a mediator of mitochondrial fission, in apoptosis.

Authors:  S Frank; B Gaume; E S Bergmann-Leitner; W W Leitner; E G Robert; F Catez; C L Smith; R J Youle
Journal:  Dev Cell       Date:  2001-10       Impact factor: 12.270

Review 6.  Photooxidation technology for correlated light and electron microscopy.

Authors:  C Meisslitzer-Ruppitsch; C Röhrl; J Neumüller; M Pavelka; A Ellinger
Journal:  J Microsc       Date:  2009-09       Impact factor: 1.758

7.  Reduction of background autofluorescence in brain sections following immersion in sodium borohydride.

Authors:  B Clancy; L J Cauller
Journal:  J Neurosci Methods       Date:  1998-09-01       Impact factor: 2.390

8.  Uncoupled mitochondria quickly shorten along their long axis to form indented spheroids, instead of rings, in a fission-independent manner.

Authors:  Yoshihiro Miyazono; Shingo Hirashima; Naotada Ishihara; Jingo Kusukawa; Kei-Ichiro Nakamura; Keisuke Ohta
Journal:  Sci Rep       Date:  2018-01-10       Impact factor: 4.379

9.  A Global Approach for Quantitative Super Resolution and Electron Microscopy on Cryo and Epoxy Sections Using Self-labeling Protein Tags.

Authors:  Andreas Müller; Martin Neukam; Anna Ivanova; Anke Sönmez; Carla Münster; Susanne Kretschmar; Yannis Kalaidzidis; Thomas Kurth; Jean-Marc Verbavatz; Michele Solimena
Journal:  Sci Rep       Date:  2017-02-02       Impact factor: 4.379

10.  Correlative analysis of immunoreactivity in confocal laser-scanning microscopy and scanning electron microscopy with focused ion beam milling.

Authors:  Takahiro Sonomura; Takahiro Furuta; Ikuko Nakatani; Yo Yamamoto; Tomo Unzai; Wakoto Matsuda; Haruki Iwai; Atsushi Yamanaka; Masanori Uemura; Takeshi Kaneko
Journal:  Front Neural Circuits       Date:  2013-02-25       Impact factor: 3.492

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  7 in total

1.  A combination of scanning electron microscopy and broad argon ion beam milling provides intact structure of secondary tissues in woody plants.

Authors:  Tomohiro Hatano; Satoshi Nakaba; Yoshiki Horikawa; Ryo Funada
Journal:  Sci Rep       Date:  2022-06-01       Impact factor: 4.996

2.  Three-dimensional analysis of interstitial cells in the lamina propria of the murine vas deferens by confocal laser scanning microscopy and FIB/SEM.

Authors:  Tasuku Hiroshige; Kei-Ichiro Uemura; Shingo Hirashima; Akinobu Togo; Keisuke Ohta; Kei-Ichiro Nakamura; Tsukasa Igawa
Journal:  Sci Rep       Date:  2022-06-08       Impact factor: 4.996

Review 3.  Organelle Interaction and Drug Discovery: Towards Correlative Nanoscopy and Molecular Dynamics Simulation.

Authors:  Zhiwei Yang; Zichen Zhang; Yizhen Zhao; Qiushi Ye; Xuhua Li; Lingjie Meng; Jiangang Long; Shengli Zhang; Lei Zhang
Journal:  Front Pharmacol       Date:  2022-06-20       Impact factor: 5.988

4.  Structural Organization and Function of the Golgi Ribbon During Cell Division.

Authors:  Inmaculada Ayala; Antonino Colanzi
Journal:  Front Cell Dev Biol       Date:  2022-06-24

5.  Functional Changes Within the Rod Inner Segment Ellipsoid in Wildtype Mice: An Optical Coherence Tomography and Electron Microscopy Study.

Authors:  Bruce A Berkowitz; Robert H Podolsky; Karen Lins Childers; Tom Burgoyne; Giulia De Rossi; Haohua Qian; Robin Roberts; Ryan Katz; Rida Waseem; Cole Goodman
Journal:  Invest Ophthalmol Vis Sci       Date:  2022-07-08       Impact factor: 4.925

6.  Whole-cell observation of ZIO-stained Golgi apparatus in rat hepatocytes with serial block-face scanning electron microscope, SBF-SEM.

Authors:  Kohei Johkura; Nobuteru Usuda; Yoshihiro Tanaka; Motoaki Fukasawa; Kazuyoshi Murata; Toru Noda; Nobuhiko Ohno
Journal:  Microscopy (Oxf)       Date:  2022-10-06       Impact factor: 2.072

7.  Correlative volume-imaging using combined array tomography and FIB-SEM tomography with beam deceleration for 3D architecture visualization in tissue.

Authors:  Shingo Hirashima; Keisuke Ohta; Yukiko Rikimaru-Nishi; Akinobu Togo; Takashi Funatsu; Risa Tsuneyoshi; Yuichi Shima; Kei-Ichiro Nakamura
Journal:  Microscopy (Oxf)       Date:  2022-06-06       Impact factor: 2.072

  7 in total

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