Literature DB >> 33203707

Plasma Vitamin C and Type 2 Diabetes: Genome-Wide Association Study and Mendelian Randomization Analysis in European Populations.

Ju-Sheng Zheng1,2, Jian'an Luan1, Eleni Sofianopoulou3, Fumiaki Imamura1, Isobel D Stewart1, Felix R Day1, Maik Pietzner1, Eleanor Wheeler1, Luca A Lotta1, Thomas E Gundersen4, Pilar Amiano5, Eva Ardanaz6,7,8, María-Dolores Chirlaque8,9, Guy Fagherazzi10,11, Paul W Franks12, Rudolf Kaaks13, Nasser Laouali11, Francesca Romana Mancini11, Peter M Nilsson12, N Charlotte Onland-Moret14, Anja Olsen15,16, Kim Overvad16,17, Salvatore Panico18, Domenico Palli19, Fulvio Ricceri20,21, Olov Rolandsson22, Annemieke M W Spijkerman23, María-José Sánchez24, Matthias B Schulze25,26,27, Núria Sala28, Sabina Sieri29, Anne Tjønneland16,30, Rosario Tumino31, Yvonne T van der Schouw14, Elisabete Weiderpass32, Elio Riboli33, John Danesh3,34,35,36,37,38, Adam S Butterworth3,34,36,37,38, Stephen J Sharp1, Claudia Langenberg1, Nita G Forouhi39, Nicholas J Wareham39.   

Abstract

OBJECTIVE: Higher plasma vitamin C levels are associated with lower type 2 diabetes risk, but whether this association is causal is uncertain. To investigate this, we studied the association of genetically predicted plasma vitamin C with type 2 diabetes. RESEARCH DESIGN AND METHODS: We conducted genome-wide association studies of plasma vitamin C among 52,018 individuals of European ancestry to discover novel genetic variants. We performed Mendelian randomization analyses to estimate the association of genetically predicted differences in plasma vitamin C with type 2 diabetes in up to 80,983 case participants and 842,909 noncase participants. We compared this estimate with the observational association between plasma vitamin C and incident type 2 diabetes, including 8,133 case participants and 11,073 noncase participants.
RESULTS: We identified 11 genomic regions associated with plasma vitamin C (P < 5 × 10-8), with the strongest signal at SLC23A1, and 10 novel genetic loci including SLC23A3, CHPT1, BCAS3, SNRPF, RER1, MAF, GSTA5, RGS14, AKT1, and FADS1. Plasma vitamin C was inversely associated with type 2 diabetes (hazard ratio per SD 0.88; 95% CI 0.82, 0.94), but there was no association between genetically predicted plasma vitamin C (excluding FADS1 variant due to its apparent pleiotropic effect) and type 2 diabetes (1.03; 95% CI 0.96, 1.10).
CONCLUSIONS: These findings indicate discordance between biochemically measured and genetically predicted plasma vitamin C levels in the association with type 2 diabetes among European populations. The null Mendelian randomization findings provide no strong evidence to suggest the use of vitamin C supplementation for type 2 diabetes prevention.
© 2020 by the American Diabetes Association.

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Year:  2020        PMID: 33203707      PMCID: PMC7783939          DOI: 10.2337/dc20-1328

Source DB:  PubMed          Journal:  Diabetes Care        ISSN: 0149-5992            Impact factor:   19.112


Introduction

Observational evidence suggests that plasma vitamin C (ascorbic acid) is inversely associated with the incidence of type 2 diabetes (1). However, evidence from randomized controlled trials (RCTs) of supplementation with vitamin C suggests no effect of supplementation on glycemia in individuals without diabetes (2) or on type 2 diabetes incidence among women at high risk of cardiovascular disease (CVD) (3). Important limitations of the RCT evidence have included small sample size of some individual trials, uncertainty of the optimal dose, baseline status, the inability to separate out the effects of vitamin C when these were used in combination with other vitamins/antioxidants, and declining compliance with the intervention over time. Conducting further RCTs to assess an impact of vitamin C on type 2 diabetes is challenging, requiring large sample size, long follow-up duration, and high cost. Meanwhile, it remains unclear whether there is a causal role of vitamin C in the prevention of type 2 diabetes. Mendelian randomization (MR) is an approach that can help to assess the potential causal relevance of a risk exposure for a disease end point, taking advantage of the random assortment of alleles at conception (4). This means that the association between a disease and a genetically determined phenotype is unlikely to be affected by reverse causation or by confounding. A limitation of MR is weak instrument bias if the genetic variants explain a small fraction of the variation in the risk factor of interest, but this could be partially addressed through the use of multiple independent genetic variants identified in genome-wide association studies (GWAS) (5). Thus far, only one genetic variant (rs33972313) at SLC23A1 has been identified to be associated with plasma vitamin C levels (6), based on a candidate gene approach, and no GWAS has been published so far. The objective of this study was to study the relationship between genetic variants and vitamin C levels and to develop a genetic instrument to be used in an MR analysis of the association of genetically predicted levels of plasma vitamin C with type 2 diabetes risk.

Research Design and Methods

Participating Studies and Genotyping

Figure 1 provides an overview of the participating cohorts, and our overall approach to data inclusion and analysis. The three steps in the process were as follows: 1) we conducted GWAS to identify genetic variants associated with plasma vitamin C levels; 2) using the GWAS-discovered genetic variants, we examined the association between genetically predicted plasma vitamin C and type 2 diabetes risk by MR analysis; and 3) for comparison with MR results, we performed analyses to evaluate the observational association between plasma vitamin C and incident type 2 diabetes. All of the studies included in the present analyses were approved by local ethics committees, and participants provided written informed consent.
Figure 1

Design of the study for MR analysis of plasma vitamin C with type 2 diabetes.

Design of the study for MR analysis of plasma vitamin C with type 2 diabetes. We performed meta-analysis of GWAS of plasma vitamin C levels in up to 52,018 individuals from the Fenland study (n = 10,771) (2), European Prospective Investigation into Cancer and Nutrition (EPIC)-InterAct study (n = 16,841) (7), EPIC Norfolk study (8) (n = 16,756, excluding duplicated samples with EPIC-InterAct), and the EPIC-CVD study (9) (n = 7,650, excluding duplicated samples with EPIC-InterAct or EPIC-Norfolk). We then estimated the association of lead genetic variants from the vitamin C GWAS meta-analysis with the risk of type 2 diabetes in a meta-analysis including participants (80,983 case participants with type 2 diabetes, and 842,909 noncase participants) from UK Biobank (10), DIAbetes Meta-ANalysis of Trans-Ethnic association studies (DIAMANTE) (European) (11), and EPIC-Norfolk study (additional case participants with type 2 diabetes not included in the DIAMANTE study: 1,220 case participants with diabetes and 18,026 noncase participants) (8). The details of each participating study and genotyping strategy and quality control procedures are described in Supplementary Table 1 and Supplementary Text. Briefly, the Fenland study is an ongoing, population-based cohort study including 12,435 adults at baseline in Cambridgeshire, U.K. (2). The GWAS included 10,771 Fenland participants with both genotype and vitamin C data. Genotype imputation was performed to the Haplotype Reference Consortium reference panel using IMPUTE v4 or the Sanger imputation server. EPIC-InterAct is a case-cohort study including 12,403 participants with incident type 2 diabetes from among 340,234 participants across eight European countries (France, Italy, Spain, U.K., Netherlands, Germany, Sweden, and Denmark) and 16,835 subcohort participants randomly selected from the full cohort, of whom 16,154 remained after exclusion of participants with prevalent diabetes (7); 16,841 participants with both genotype and vitamin C data contributed to the present GWAS. EPIC-Norfolk is an ongoing U.K.-based prospective cohort study with 25,639 men and women aged 40–79 at baseline (8), among whom 16,756 participants had the required data to be included in the vitamin C GWAS. EPIC-CVD is also a case-cohort study nested within the EPIC study, with a random subcohort of 18,249 participants and 24,557 adults who later developed CVD during the follow-up. EPIC-CVD shared the random subcohort with the EPIC-InterAct for eight participating countries (9), and a total of 7,650 EPIC-CVD participants contributed to the present vitamin C GWAS. Genotype imputation of the EPIC-InterAct, EPIC-Norfolk, and EPIC-CVD was performed to the Haplotype Reference Consortium reference panel using IMPUTE v4 software. The UK Biobank study is a population-based cohort of ∼0.5 million U.K. individuals aged 40–69 years recruited between 2006 and 2010 across the U.K. (10). Genotype data and prevalent type 2 diabetes information were both available among a total of 449,333 individuals in the UK Biobank data set (24,758 case participants and 424,575 noncase participants). DIAMANTE is a consortium that published a large-scale meta-analysis of GWAS of type 2 diabetes in individuals of different ethnicities. Summary results from the DIAMANTE meta-analyses among Europeans were made publicly available (11).

Plasma Vitamin C Measurement

Plasma vitamin C was measured using high-performance liquid chromatography with ultraviolet detection in EPIC-InterAct and EPIC-CVD using samples that had been stored at −196°C (−150°C for Danish samples) (12). In EPIC-Norfolk and Fenland, plasma vitamin C was measured with a fluorometric assay using samples stored at −70°C. For each of these studies, plasma was stabilized in a standardized volume of metaphosphoric acid. The distribution of plasma vitamin C levels in each participating cohort is shown in Supplementary Fig. 1.

Statistical Analysis

Meta-analysis of GWAS

For the GWAS of plasma vitamin C among each participating cohort, standardized residuals (in SD units) for plasma vitamin C were calculated, adjusting for age, sex, and study center (where appropriate). Moreover, in each cohort, GWAS was performed by running linear regression with SNPTEST (v2.5.4) assuming an additive effect, adjusting for the first 10 genetic principal components of ancestry within each cohort. Meta-analysis of the GWAS results was conducted by combining β coefficients and SEs using inverse variance-weighted fixed-effect meta-analysis across the participating studies using METAL (13). Associated loci were identified using the conventional threshold for genome-wide statistical significance (P < 5 × 10−8). At each locus, a lead single-nucleotide polymorphism (SNP) was identified as the SNP with the lowest P value within a 1 megabase-pair window. Functional annotation and pathway analysis of the GWAS results were performed using MAGENTA and DEPICT (14,15) (Supplementary Text). Linear regression models were used to estimate the variance in plasma vitamin C explained by the identified lead SNPs in each of Fenland, EPIC-InterAct, EPIC-Norfolk, and EPIC-CVD studies. We also calculated the F statistic in the EPIC-Norfolk study to evaluate the strength of the instrument. We estimated the genetic correlations of vitamin C levels with type 2 diabetes and related glycemic markers (fasting glucose, insulin, 2-h glucose, HOMA of insulin resistance [HOMA-IR], HOMA of β-cell function [HOMA-β], and hemoglobin A1c [HbA1c]) using the meta-analyzed GWAS results and linkage disequilibrium score regression on the LD Hub platform (16), and the results were corrected for multiple testing.

Association of Genetically Predicted Levels of Vitamin C With Type 2 Diabetes: MR Analysis

We used two-sample MR analysis to test for an association between a genetically predicted difference in plasma vitamin C levels and type 2 diabetes risk. To this end, we used estimates of each of the “SNP to vitamin C” and “SNP to diabetes” associations to examine the association between a genetically predicted 1-SD difference in plasma vitamin C and type 2 diabetes risk. Estimates from multiple SNPs were pooled using an inverse variance–weighted method (5). MR assumptions are violated if there is horizontal pleiotropy. Therefore, in the EPIC-InterAct study, we constructed a vitamin C-raising genetic score based on the identified genetic variants and examined its association with anthropometric, lifestyle, dietary factors, and lipid biomarkers to examine the potential pleiotropic effect of the genetic score. The potential pleiotropic effect of the identified SNPs was further examined by investigating their associations with 174 blood metabolites using GWAS summary statistics from genome-wide meta-analysis of these metabolites across Fenland, EPIC-Norfolk, and Efficiency and Safety of Varying the Frequency of Whole Blood Donation (INTERVAL) studies, as previously reported (17). In addition, directional pleiotropy for the used SNPs was tested using MR-Egger intercept (18). We used MR-Egger regression to detect and adjust for potential unbalanced pleiotropy in the MR analysis (18), and the Cochran Q statistic to examine the heterogeneity of the association between different genetic variants, because different genetic variants may represent different biological pathways. We also used a weighted median MR method (19) as a sensitivity analysis and highlighted the weighted median results if significant heterogeneity of the associations among different genetic variants was observed. We conducted a reverse MR analysis to examine the potential association of genetically predicted risk of type 2 diabetes on plasma vitamin C concentrations, using a score composed of 231 type 2 diabetes SNPs identified in a recent GWAS (11). We calculated the estimates of a genetically predicted 1-SD difference in plasma vitamin C with several glycemic traits using data from Meta-Analysis of Glucose and Insulin-related traits Consortium (MAGIC): fasting glucose (n = 133,010), 2-h glucose (n = 42,854), fasting insulin (n = 108,557), HOMA-IR (n = 46,186), HOMA-β (n = 46,186), and HbA1c (n = 123,665).

Observational Association of Plasma Vitamin C With Type 2 Diabetes

For the observational association of plasma vitamin C and incident type 2 diabetes in the EPIC-InterAct study, we used Prentice-weighted Cox regression, accounting for the design of a case-cohort study, to estimate the country-specific hazard ratios and 95% CIs for associations per 1-SD difference (SD calculated in the subcohort) of plasma vitamin C with incident type 2 diabetes. The estimates were adjusted for potential confounding factors of age as the underlying time scale, sex, center, physical activity, smoking status, employment status, marital status, education level, alcohol intake, total energy intake, individual plasma carotenoids, BMI, and waist circumference. The results across countries were pooled by random-effects meta-analysis. Statistical analyses were performed in Stata 14 (StataCorp, College Station, TX), R 3.2.2 (R Foundation for Statistical Computing), and METAL 2011-03-25.

Data and Resource Availability

GWAS summary statistics for the plasma vitamin C levels can be accessed at figshare.com (https://doi.org/10.6084/m9.figshare.13227443.v1).

Results

Population Characteristics

Plasma vitamin C was associated with a variety of anthropometric, lifestyle behavioral factors (education, employment status, physical activity, and smoking status), dietary factors, and lipid biomarkers (Supplementary Table 2). In contrast, the vitamin C-raising genetic score calculated from the vitamin C-raising alleles (generated from the GWAS results) was positively associated only with plasma vitamin C levels, and it was not associated with other factors including anthropometric, lifestyle, diet factors, or lipid biomarkers (Supplementary Table 3).

Meta-analysis of GWAS of Plasma Vitamin C

Genome-wide meta-analysis identified 11 independent genomic loci associated with plasma vitamin C levels (Table 1), of which 10 were novel, while SLC23A1 (6) was a known plasma vitamin C locus (Table 1 and Supplementary Figs. 2 and 3). The regional plots of the identified loci are presented in Supplementary Figs. 4–12. The heterogeneity for the association of the identified lead SNPs with plasma vitamin C across individual cohorts was low (Supplementary Fig. 13). The strongest signal was rs33972313 within the SLC23A1 gene (P = 4.61 × 10−90) on chromosome 5, a missense mutation that was reported to be associated with circulating vitamin C levels in a previous candidate gene study (6). SLC23A1 encodes solute carrier family 23 member 1, also known as sodium-dependent vitamin C transporter 1 (SVCT1), which is responsible for the uptake of vitamin C into target tissues (20). The second strongest signal rs13028225 (P = 2.38 × 10−30) was within the SLC23A3 gene on chromosome 2, which encodes sodium-dependent vitamin C transporter 3 (SVCT3), belonging to the same family as SLC23A3.
Table 1

Lead SNPs identified in the genome-wide meta-analysis of plasma vitamin C across four cohort studies (Fenland, EPIC-Norfolk, EPIC-InterAct, and EPIC-CVD)

ChromosomePosition (GRCh37)Lead SNPsEffect alleleOther alleleEAFβSEP valueNearest gene
12330190rs6693447TG0.5510.0390.0066.25 × 10−10RER1
2220031255rs13028225TC0.8570.1020.0092.38 × 10−30SLC23A3
5138715502rs33972313CT0.9680.3600.0184.61 × 10−90SLC23A1
5176799992rs10051765CT0.3420.0390.0073.64 × 10−9RGS14
652725787rs7740812GA0.5940.0380.0061.88 × 10−9GSTA5
1161570783rs174547CT0.3280.0360.0073.84 × 10−8FADS1
1296249111rs117885456AG0.0870.0780.0121.70 × 10−11SNRPF
12102093459rs2559850AG0.5980.0580.0066.30 × 10−20CHPT1
14105253581rs10136000AG0.2830.0400.0071.33 × 10−8AKT1
1679740541rs56738967CG0.3210.0410.0077.62 × 10−10MAF
1759456589rs9895661TC0.8170.0630.0081.05 × 10−14BCAS3

EAF, effect allele frequency.

The β coefficients are in SD unit per allele; effect allele is the vitamin C-raising allele. The pooled sample size for the genome-wide meta-analyses is 52,018.

Lead SNPs identified in the genome-wide meta-analysis of plasma vitamin C across four cohort studies (Fenland, EPIC-Norfolk, EPIC-InterAct, and EPIC-CVD) EAF, effect allele frequency. The β coefficients are in SD unit per allele; effect allele is the vitamin C-raising allele. The pooled sample size for the genome-wide meta-analyses is 52,018. We identified further genomic loci with less obvious linkage to the metabolism of vitamin C, such as RER1 (rs6693447, P = 6.25 × 10−10, encoding retention in endoplasmic reticulum sorting receptor 1), RGS14 (rs10051765, P = 3.64 × 10−9, encoding regulator of G protein signaling 14), GSTA5 (rs7740812, P = 1.88 × 10−9, encoding glutathione S-transferase α 5), FADS1 (rs174547, P = 3.84 × 10−8, encoding fatty acid desaturase 1), SNRPF (rs117885456, P = 1.7 × 10−11, encoding small nuclear ribonucleoprotein polypeptide F), CHPT1 (rs2559850, P = 6.3 × 10−20, encoding choline phosphotransferase 1), AKT1 (rs10136000, P = 1.33 × 10−8, encoding serine-threonine protein kinase), MAF (rs56738967, P = 7.62 × 10−10, encoding MAF bZIP transcription factor), and BCAS3 (rs9895661, P = 1.05 × 10−14, encoding microtubule associated cell migration factor). Results of pathway analysis and tissue and gene set enrichment analysis did not reveal a specific pathway or enriched tissues/gene sets (Supplementary Tables 4 and 5). The variance of plasma vitamin C explained by the 11 lead SNPs was 1.87% on average, with 2.51% in Fenland, 1.74% in EPIC-Norfolk, 1.61% in the InterAct subcohort, 1.63% in the InterAct nonsubcohort, 1.07% in the EPIC-CVD subcohort, and 0.7% in the EPIC-CVD nonsubcohort. The F statistic of the vitamin C genetic score for MR analysis was 30.5. The estimates of genome-wide genetic correlations of vitamin C levels with type 2 diabetes and glycemic traits were significant only for fasting insulin (rgenetics = −0.22, P = 0.005) after controlling for multiple testing (Supplementary Table 6).

Association of Plasma Vitamin C-Raising Alleles With Type 2 Diabetes

From among 11 SNPs that were significant at the genome-wide level, there was a pleiotropic effect of the variant at FADS1, which was associated with a large number of glycerophospholipids or sphingolipids (Fig. 2). Thus, we excluded this SNP from our MR analysis, using the other 10 SNPs in a genetic instrument to examine the causal association of plasma vitamin C with type 2 diabetes (Supplementary Table 7).
Figure 2

Volcano plot for the association of the plasma vitamin C genetic score with blood metabolites. Associations of the 11 variant scores and the score excluding the FADS1 variant were estimated using fixed-effects meta-analyses of individual variant-metabolite associations aligned to the plasma vitamin C-raising alleles. The horizontal dashed line indicates a Bonferroni-corrected significance threshold (corrected for 175 tests), and diameters of points are proportional to abs(effect size)*50, where “abs” is the function to calculate the absolute value of the effect size.

Volcano plot for the association of the plasma vitamin C genetic score with blood metabolites. Associations of the 11 variant scores and the score excluding the FADS1 variant were estimated using fixed-effects meta-analyses of individual variant-metabolite associations aligned to the plasma vitamin C-raising alleles. The horizontal dashed line indicates a Bonferroni-corrected significance threshold (corrected for 175 tests), and diameters of points are proportional to abs(effect size)*50, where “abs” is the function to calculate the absolute value of the effect size. Genetic predisposition to a higher level of plasma vitamin C was not associated with odds of type 2 diabetes, with an estimated odds ratio of 1.03 (95% CI 0.96, 1.10) per 1-SD difference in plasma vitamin C level (Fig. 3). There was no evidence of directional horizontal pleiotropy (P = 0.41 for the test of MR-Egger intercept) and heterogeneity for the genetic instrument used (Supplementary Table 8), which confirmed the validity of our genetic instrument. Sensitivity analysis using different methods (MR-Egger, weighted median) of MR did not find a substantial difference compared with the inverse variance–weighted method. The reverse MR analysis suggested that genetically higher risk of type 2 diabetes was not significantly associated with plasma vitamin C levels (Supplementary Fig. 14). In the observational analysis, a 1-SD difference in plasma vitamin C level was associated with a lower hazard of type 2 diabetes (hazard ratio 0.88; 95% CI 0.82, 0.94) (Fig. 3).
Figure 3

Genetically predicted and observational associations of plasma vitamin C with type 2 diabetes. A: MR and observational estimate of plasma vitamin C with type 2 diabetes. MR estimate of the association between a genetically predicted difference of 1 SD in plasma vitamin C and type 2 diabetes (odds ratio [OR]) was determined using different methods: inverse-variance weighted, MR Egger, and weighted median. Ten lead genetic variants (excluding FADS1 variant due to pleiotropic effects) identified in the present genome-wide meta-analysis were used for the MR analysis. Observational estimate of the association of plasma vitamin C with type 2 diabetes (hazard ratio [HR]) was estimated in EPIC-InterAct using Prentice-weighted Cox regression, adjusting for potential confounders. B: Scatter plot of genetic association with type 2 diabetes and genetic association with the plasma vitamin C levels.

Genetically predicted and observational associations of plasma vitamin C with type 2 diabetes. A: MR and observational estimate of plasma vitamin C with type 2 diabetes. MR estimate of the association between a genetically predicted difference of 1 SD in plasma vitamin C and type 2 diabetes (odds ratio [OR]) was determined using different methods: inverse-variance weighted, MR Egger, and weighted median. Ten lead genetic variants (excluding FADS1 variant due to pleiotropic effects) identified in the present genome-wide meta-analysis were used for the MR analysis. Observational estimate of the association of plasma vitamin C with type 2 diabetes (hazard ratio [HR]) was estimated in EPIC-InterAct using Prentice-weighted Cox regression, adjusting for potential confounders. B: Scatter plot of genetic association with type 2 diabetes and genetic association with the plasma vitamin C levels.

Association of Vitamin C-Raising Genetic Risk Score With Glycemic Traits

In the MR analysis, a genetically predicted higher plasma vitamin C level was not significantly associated with any of the examined glycemic markers, including fasting insulin, glucose, 2-h glucose, HOMA-IR, HOMA-β, and HbA1c (Supplementary Fig. 15). This is consistent with the lack of association seen for type 2 diabetes. The associations of individual vitamin C-raising alleles with these traits are presented in Supplementary Fig. 16.

Conclusions

This study represents the first GWAS to be conducted for plasma vitamin C, identifying 11 genomic regions associated with plasma vitamin C, including 10 that were novel loci and confirming the previously identified candidate locus at SLC23A1 (rs33972313). The results from using these newly identified genome-wide significant lead SNPs at corresponding loci in a genetic instrument suggested that a genetically higher level of plasma vitamin C was not significantly associated with type 2 diabetes risk or with glycemic traits.

Findings in Context of Other Evidence: MR Findings

There is no prior published MR analysis of plasma vitamin C and type 2 diabetes or glycemic traits to compare with our current findings. However, our finding of no evidence for an association of genetic markers of plasma vitamin C with type 2 diabetes or with any of the glycemic traits is consistent with prior null findings from RCTs of vitamin C supplementation (2,3). An obvious explanation for the discrepancy between the observational and the MR or RCT evidence is likely to be confounding by several factors, including socioeconomic, dietary, and lifestyle behavioral factors, as previously discussed (21), and as we found in the current analyses.

Findings in Context of Other Evidence: GWAS Findings

Our novel GWAS findings stimulate greater understanding of the biology of plasma vitamin C. Prior evidence suggests that vitamin C homeostasis is mainly regulated by two categories of genes. Some genes are involved in direct transport and regulation of vitamin C concentrations, including vitamin C absorption from food, renal reabsorption, and cellular uptake, particularly the sodium-dependent vitamin C transporters of the SLC23 family (e.g., SLC23A1 and SLC23A2), whereas others are related to antioxidant and oxidative stress (22). SLC23A1 encodes a well-known protein SVCT1 affecting the circulating vitamin C levels (6,22), and the lead SNP rs33972313 identified in the current study also showed consistent, reproducible evidence in a previous study (6). Unlike SLC23A1, we did not identify SNPs of genome-wide significance at SLC23A2, although both genes encode SVCTs, which are specific for vitamin C transportation. It may be that SVCT2 encoded by SLC23A2 mainly regulates tissue levels of vitamin C and that its impact on circulating vitamin C is minimal, as indicated in a recent review (22). Notably, we identified GWAS hits at SLC23A3 associated with plasma vitamin C levels. SLC23A3 encodes SVCT3, which is an orphan transporter, and its functional role is largely unknown (23). There is evidence showing that SVCT3 is mainly expressed in the kidney (23) and that the SLC23A3 mRNA expression level is highly correlated with the estimated glomerular filtration rate, a marker of renal function (24). Therefore, genetic variation at SLC23A3 may affect circulating vitamin C levels by regulating renal function and related vitamin C reabsorption by the kidney. In addition, we identified several other genomic regions that might affect vitamin C levels potentially through regulating renal function and renal reabsorption of vitamin C, including RGS14, MAF, and BCAS3 (25). Other genetic loci identified in the present GWAS may be related to antioxidant and oxidative stress. The GSTA5 gene encodes glutathione S-transferase (GST)-α5, a detoxifying enzyme belonging to the GST families, which contributes to the glutathione–vitamin C antioxidant cycle (22). Genetic variants at FADS1 were associated with lipid peroxides, as well as other oxidative stress markers (26), and might influence vitamin C levels through the oxidative stress-related pathway. The RER1 may be related to endoplasmic reticulum stress, which is closely related to oxidative stress (27). Genetic variation at CHPT1 may lead to disruption of phosphatidylcholine synthesis, which is closely related to the antioxidant system (28). Finally, we identified genetic variants at SNRPF gene associated with plasma vitamin C, but a potentially functional link between this gene and vitamin C metabolism is unclear.

Strengths and Limitations

This study has several strengths. We conducted the first GWAS for plasma vitamin C using a large sample from multiple cohorts and identified 10 novel genetic loci for plasma vitamin C in addition to confirming the single variant described previously from candidate gene analysis (6). The current work expands our understanding about vitamin C biology, and it enabled the derivation of a genetic instrument to use in MR analysis. Our study is the first large MR analysis for circulating vitamin C and type 2 diabetes, with a large number of case participants in the genotype–type 2 diabetes association. We examined the association of genetically predicted vitamin C levels with a variety of diabetes-related traits, which also confirmed the observed null results for type 2 diabetes. Limitations of our work include that despite the large GWAS meta-analysis we conducted, the variation of vitamin C explained by the SNPs used in the MR was still relatively small. The low variability of plasma vitamin C explained by these SNPs may limit the statistical power and precision for the MR analysis. Our analyses included White European populations; hence, our findings may not be generalizable to other populations. It is possible that pleiotropic effects of genetic variants used in MR may potentially exist, although we did not find evidence of pleiotropic effects (i.e., none of the SNPs used in the MR were associated with tested confounders) or heterogeneity across the genetic variants. Therefore, confounding may not be a substantial concern, and our instrument is specific for vitamin C, which fulfils an important criterion to identify causality. In addition, the MR estimate may be biased by gene-environment interaction or canalization, which should be investigated in future research.

Implications of the Current Findings

Clarification of the potential role of vitamin C in type 2 diabetes development is important as the prevalence of type 2 diabetes continues to expand globally and identification of modifiable risk factors is critical to curb the type 2 diabetes pandemic. Despite interest in vitamin C supplement use, the current findings indicate that there is unlikely to be a causal role of vitamin C as an isolated micronutrient on type 2 diabetes and its related traits in general populations. This should be distinguished from the use of plasma vitamin C as a biomarker to objectively estimate or be a proxy indicator for the consumption of fruit and vegetables (29). The latter provides support for the previous interpretation that the inverse observational prospective associations between plasma vitamin C and cardiometabolic diseases, including type 2 diabetes (1,30–32), reflect the potential benefits of promoting higher dietary consumption of fruit and vegetables. It is important to clarify the two distinct phenomena: the current findings suggest no evidence for an association with type 2 diabetes of genetically predicted plasma vitamin C level as a nutrient per se, but this does not rule out the utility of plasma vitamin C as a valid biomarker of fruit and vegetable intake, reducing measurement error and recall bias of subjective reporting. It is likely that a synergetic effect of various constituents in fruits and vegetables (including vitamins, minerals, numerous phytochemicals, and dietary fiber) rather than vitamin C alone may be responsible for observed inverse association of fruit and vegetable consumption on type 2 diabetes risk. In summary, using a genome-wide meta-analysis approach, we identified 10 novel genetic loci and confirmed a known locus at SLC23A1 for plasma vitamin C levels. With these newly identified genetic variants as a genetic instrument, our MR analysis found that there was no evidence to support a causal association between plasma vitamin C and type 2 diabetes or with related metabolic traits among European populations. These findings suggest that previous observations on higher vitamin C levels and lower type 2 diabetes risk may be attributed to a dietary pattern high in fruit and vegetable intake rather than to vitamin C level as an isolated nutrient. The implication of the current study is that vitamin C supplementation aiming to increase circulating vitamin C levels is unlikely to be helpful for the prevention of type 2 diabetes among individuals of European ancestries.
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7.  Biological interpretation of genome-wide association studies using predicted gene functions.

Authors:  Tune H Pers; Juha M Karjalainen; Yingleong Chan; Harm-Jan Westra; Andrew R Wood; Jian Yang; Julian C Lui; Sailaja Vedantam; Stefan Gustafsson; Tonu Esko; Tim Frayling; Elizabeth K Speliotes; Michael Boehnke; Soumya Raychaudhuri; Rudolf S N Fehrmann; Joel N Hirschhorn; Lude Franke
Journal:  Nat Commun       Date:  2015-01-19       Impact factor: 14.919

8.  The association between a biomarker score for fruit and vegetable intake and incident type 2 diabetes: the EPIC-Norfolk study.

Authors:  A J M Cooper; S J Sharp; R N Luben; K-T Khaw; N J Wareham; N G Forouhi
Journal:  Eur J Clin Nutr       Date:  2014-11-12       Impact factor: 4.016

9.  METAL: fast and efficient meta-analysis of genomewide association scans.

Authors:  Cristen J Willer; Yun Li; Gonçalo R Abecasis
Journal:  Bioinformatics       Date:  2010-07-08       Impact factor: 6.937

10.  Mendelian randomization analysis with multiple genetic variants using summarized data.

Authors:  Stephen Burgess; Adam Butterworth; Simon G Thompson
Journal:  Genet Epidemiol       Date:  2013-09-20       Impact factor: 2.135

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  19 in total

1.  The role of vitamin C in pneumonia and COVID-19 infection in adults with European ancestry: a Mendelian randomisation study.

Authors:  L L Hui; E A S Nelson; S L Lin; J V Zhao
Journal:  Eur J Clin Nutr       Date:  2021-08-30       Impact factor: 4.884

Review 2.  WNT Ligand Dependencies in Pancreatic Cancer.

Authors:  Kristina Y Aguilera; David W Dawson
Journal:  Front Cell Dev Biol       Date:  2021-04-28

3.  Genetically Determined Reproductive Aging and Coronary Heart Disease: A Bidirectional 2-sample Mendelian Randomization.

Authors:  Veerle Dam; N Charlotte Onland-Moret; Stephen Burgess; Maria-Dolores Chirlaque; Sanne A E Peters; Ewoud Schuit; Kaja Tikk; Elisabete Weiderpass; Clare Oliver-Williams; Angela M Wood; Anne Tjønneland; Christina C Dahm; Kim Overvad; Marie-Christine Boutron-Ruault; Matthias B Schulze; Antonia Trichopoulou; Pietro Ferrari; Giovanna Masala; Vittorio Krogh; Rosario Tumino; Giuseppe Matullo; Salvatore Panico; Jolanda M A Boer; W M Monique Verschuren; Marit Waaseth; Maria José Sánchez Pérez; Pilar Amiano; Liher Imaz; Conchi Moreno-Iribas; Olle Melander; Sophia Harlid; Maria Nordendahl; Patrik Wennberg; Timothy J Key; Elio Riboli; Carmen Santiuste; Rudolf Kaaks; Verena Katzke; Claudia Langenberg; Nicholas J Wareham; Heribert Schunkert; Jeanette Erdmann; Christina Willenborg; Christian Hengstenberg; Marcus E Kleber; Graciela Delgado; Winfried März; Stavroula Kanoni; George Dedoussis; Panos Deloukas; Majid Nikpay; Ruth McPherson; Markus Scholz; Andrej Teren; Adam S Butterworth; Yvonne T van der Schouw
Journal:  J Clin Endocrinol Metab       Date:  2022-06-16       Impact factor: 6.134

4.  Diet-Derived Antioxidants and Risk of Kidney Stone Disease: Results From the NHANES 2007-2018 and Mendelian Randomization Study.

Authors:  Zhongyu Jian; Menghua Wang; Xi Jin; Hong Li; Kunjie Wang
Journal:  Front Nutr       Date:  2021-12-21

5.  Cardiometabolic, Lifestyle, and Nutritional Factors in Relation to Varicose Veins: A Mendelian Randomization Study.

Authors:  Shuai Yuan; Maria Bruzelius; Scott M Damrauer; Susanna C Larsson
Journal:  J Am Heart Assoc       Date:  2021-10-20       Impact factor: 5.501

6.  Mendelian randomization to evaluate the effect of plasma vitamin C levels on the risk of Alzheimer's disease.

Authors:  Haijie Liu; Yan Zhang; Yang Hu; Haihua Zhang; Tao Wang; Zhifa Han; Shan Gao; Longcai Wang; Guiyou Liu
Journal:  Genes Nutr       Date:  2021-10-29       Impact factor: 5.523

7.  Association between Circulating Antioxidants and Longevity: Insight from Mendelian Randomization Study.

Authors:  Zhimin Yu; Fangfang Zhang; Chengkai Xu; Yanggan Wang
Journal:  Biomed Res Int       Date:  2022-01-29       Impact factor: 3.411

8.  Dietary-Derived Essential Nutrients and Amyotrophic Lateral Sclerosis: A Two-Sample Mendelian Randomization Study.

Authors:  Kailin Xia; Yajun Wang; Linjing Zhang; Lu Tang; Gan Zhang; Tao Huang; Ninghao Huang; Dongsheng Fan
Journal:  Nutrients       Date:  2022-02-22       Impact factor: 5.717

9.  Effect of plasma vitamin C levels on Parkinson's disease and age at onset: a Mendelian randomization study.

Authors:  Haijie Liu; Yan Zhang; Haihua Zhang; Longcai Wang; Tao Wang; Zhifa Han; Liyong Wu; Guiyou Liu
Journal:  J Transl Med       Date:  2021-05-24       Impact factor: 5.531

10.  Circulating vitamin C concentration and risk of cancers: a Mendelian randomization study.

Authors:  Yuanqing Fu; Fengzhe Xu; Longda Jiang; Zelei Miao; Xinxiu Liang; Jian Yang; Susanna C Larsson; Ju-Sheng Zheng
Journal:  BMC Med       Date:  2021-07-30       Impact factor: 8.775

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