Literature DB >> 33196830

GenBank.

Eric W Sayers1, Mark Cavanaugh1, Karen Clark1, Kim D Pruitt1, Conrad L Schoch1, Stephen T Sherry1, Ilene Karsch-Mizrachi1.   

Abstract

GenBank® (https://www.ncbi.nlm.nih.gov/genbank/) is a comprehensive, public database that contains 9.9 trillion base pairs from over 2.1 billion nucleotide sequences for 478 000 formally described species. Daily data exchange with the European Nucleotide Archive and the DNA Data Bank of Japan ensures worldwide coverage. Recent updates include new resources for data from the SARS-CoV-2 virus, updates to the NCBI Submission Portal and associated submission wizards for dengue and SARS-CoV-2 viruses, new taxonomy queries for viruses and prokaryotes, and simplified submission processes for EST and GSS sequences. Published by Oxford University Press on behalf of Nucleic Acids Research 2020.

Entities:  

Year:  2021        PMID： 33196830     DOI： 10.1093/nar/gkaa1023

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


  45 in total

1.  Isolation and molecular identification of native As-resistant bacteria: As(III) and As(V) removal capacity and possible mechanism of detoxification.

Authors:  U E Rodríguez-Castrejón; A H Serafin-Muñoz; A Alvarez-Vargas; G Cruz-Jímenez; B Noriega-Luna
Journal:  Arch Microbiol       Date:  2022-02-23       Impact factor: 2.552

2.  The European Nucleotide Archive in 2021.

Authors:  Carla Cummins; Alisha Ahamed; Raheela Aslam; Josephine Burgin; Rajkumar Devraj; Ossama Edbali; Dipayan Gupta; Peter W Harrison; Muhammad Haseeb; Sam Holt; Talal Ibrahim; Eugene Ivanov; Suran Jayathilaka; Vishnukumar Kadhirvelu; Simon Kay; Manish Kumar; Ankur Lathi; Rasko Leinonen; Fabio Madeira; Nandana Madhusoodanan; Milena Mansurova; Colman O'Cathail; Matt Pearce; Stéphane Pesant; Nadim Rahman; Jeena Rajan; Gabriele Rinck; Sandeep Selvakumar; Alexey Sokolov; Swati Suman; Ross Thorne; Prabhat Totoo; Senthilnathan Vijayaraja; Zahra Waheed; Ahmad Zyoud; Rodrigo Lopez; Tony Burdett; Guy Cochrane
Journal:  Nucleic Acids Res       Date:  2022-01-07       Impact factor: 16.971

3.  ViroidDB: a database of viroids and viroid-like circular RNAs.

Authors:  Benjamin D Lee; Uri Neri; Caleb J Oh; Peter Simmonds; Eugene V Koonin
Journal:  Nucleic Acids Res       Date:  2022-01-07       Impact factor: 16.971

4.  Identifying SARS-CoV-2 regional introductions and transmission clusters in real time.

Authors:  Jakob McBroome; Jennifer Martin; Adriano de Bernardi Schneider; Yatish Turakhia; Russell Corbett-Detig
Journal:  Virus Evol       Date:  2022-06-16

5.  Niche shifts after island colonization spurred adaptive diversification and speciation in a cosmopolitan bird clade.

Authors:  Oriol Lapiedra; Ferran Sayol; Joan Garcia-Porta; Daniel Sol
Journal:  Proc Biol Sci       Date:  2021-09-01       Impact factor: 5.530

6.  Whole-Transcriptome Analysis Reveals Autophagy Is Involved in Early Senescence of zj-es Mutant Rice.

Authors:  Jia Sun; Weifang Liang; Shenghai Ye; Xinyu Chen; Yuhang Zhou; Jianfei Lu; Ying Shen; Xuming Wang; Jie Zhou; Chulang Yu; Chengqi Yan; Bingsong Zheng; Jianping Chen; Yong Yang
Journal:  Front Plant Sci       Date:  2022-06-03       Impact factor: 6.627

7.  FUNAGE-Pro: comprehensive web server for gene set enrichment analysis of prokaryotes.

Authors:  Anne de Jong; Oscar P Kuipers; Jan Kok
Journal:  Nucleic Acids Res       Date:  2022-05-31       Impact factor: 19.160

8.  GWAS Reveals a Novel Candidate Gene CmoAP2/ERF in Pumpkin (Cucurbita moschata) Involved in Resistance to Powdery Mildew.

Authors:  Hemasundar Alavilli; Jeong-Jin Lee; Chae-Rin You; Yugandhar Poli; Hyeon-Jai Kim; Ajay Jain; Kihwan Song
Journal:  Int J Mol Sci       Date:  2022-06-10       Impact factor: 6.208

9.  Virome of Grapevine Germplasm from the Anapa Ampelographic Collection (Russia).

Authors:  Darya Shvets; Elena Porotikova; Kirill Sandomirsky; Svetlana Vinogradova
Journal:  Viruses       Date:  2022-06-15       Impact factor: 5.818

10.  Characterization of metal(loid)s and antibiotic resistance in bacteria of human gut microbiota from chronic kidney disease subjects.

Authors:  María V Miranda; Fernanda C González; Osvaldo S Paredes-Godoy; Mario A Maulén; Claudio C Vásquez; Waldo A Díaz-Vásquez
Journal:  Biol Res       Date:  2022-06-17       Impact factor: 7.634
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