| Literature DB >> 33194573 |
Wei Wu1,2, Zhong Deng1,2, Wahafu Alafate1,2, Yichang Wang1,2, Jianyang Xiang1,2, Lizhe Zhu3, Bolin Li4, Maode Wang1,2, Jia Wang1,2.
Abstract
Introduction: Traditional classification that divided gliomas into glioblastoma multiformes (GBM) and lower grade gliomas (LGG) based on pathological morphology has been challenged over the past decade by improvements in molecular stratification, however, the reproducibility and diagnostic accuracy of glioma classification still remains poor. This study aimed to establish and validate a novel nomogram for the preoperative diagnosis of GBM by using integrated data combined with feasible baseline characteristics and preoperative tests. Material and method: The models were established in a primary cohort that included 259 glioma patients who had undergone surgical resection and were pathologically diagnosed from March 2014 to May 2016 in the First Affiliated Hospital of Xi'an Jiaotong University. The preoperative data were used to construct three models by the best subset regression, the forward stepwise regression, and the least absolute shrinkage and selection operator, and to furthermore establish the nomogram among those models. The assessment of nomogram was carried out by the discrimination and calibration in internal cohorts and external cohorts. Results and discussion: Out of all three models, model 2 contained eight clinical-related variables, which exhibited the minimum Akaike Information Criterion (173.71) and maximum concordance index (0.894). Compared with the other two models, the integrated discrimination index for model 2 was significantly improved, indicating that the nomogram obtained from model 2 was the most appropriate model. Likewise, the nomogram showed great calibration and significant clinical benefit according to calibration curves and the decision curve analysis.Entities:
Keywords: GBM; diagnosis; integrated profiling; nomogram; preoperative prediction
Year: 2020 PMID: 33194573 PMCID: PMC7609958 DOI: 10.3389/fonc.2020.01750
Source DB: PubMed Journal: Front Oncol ISSN: 2234-943X Impact factor: 6.244
Clinical characteristics of patients in the primary and validation cohorts.
| Sex | 0.943 | |||
| Male | 139 (53.7%) | 58 (54.7%) | 88 (55.3%) | |
| Female | 120 (46.3%) | 48 (45.3%) | 71 (44.7%) | |
| Age, median (IQR), years | 49.00 (36.50–58.50) | 49.50 (38.00–57.50) | 50.00 (38.00–58.00) | 0.915 |
| BMI, median (IQR), kg/m2 | 22.20 (20.70–23.53) | 22.17 (20.75–23.88) | 22.49 (21.17–23.13) | 0.148 |
| pKPS | 0.691 | |||
| <70 | 78 (30.1%) | 29 (27.4%) | 42 (26.4%) | |
| ≥70 | 181 (69.9%) | 77 (72.6%) | 117 (73.6%) | |
| Tumor grade | 0.682 | |||
| LGG | 116 (44.8%) | 48 (45.3%) | 78 (49.1%) | |
| GBM | 143 (55.2%) | 58 (54.7%) | 81 (50.9%) | |
| pEO | 0.387 | |||
| Yes | 88 (33.9%) | 36 (34.0%) | 64 (40.3%) | |
| No | 171 (66.1%) | 70 (66.0%) | 95 (59.7%) | |
| SIRI | 1.40 (0.79–2.55) | 1.35 (0.70–1.94) | 1.37 (0.64–2.06) | 0.194 |
| Tumor volume, median (IQR), cm3 | 32.38 (15.76–50.71) | 31.44 (13.43–49.18) | 33.02 (15.99–50.18) | 0.368 |
| Tumor location | 0.891 | |||
| Supratentorial | 133 (51.4%) | 57 (53.8%) | 81 (50.9%) | |
| Infratentorial | 126 (48.6%) | 49 (46.2%) | 78 (49.9%) | |
| Tumor multifocality | 0.419 | |||
| Yes | 50 (19.3%) | 26 (24.5%) | 29 (18.2%) | |
| No | 209 (80.7%) | 80 (75.5%) | 130 (81.8%) | |
| Annular enhancement | 0.393 | |||
| Yes | 175 (67.6%) | 69 (65.1%) | 97 (61.1%) | |
| No | 84 (32.4%) | 37 (34.9%) | 62 (38.9%) | |
| Tumor necrosis volume, median (IQR), cm3 | 16.72 (9.56–23.25) | 15.19 (9.11–22.89) | 16.28 (8.98–22.96) | 0.274 |
| PTE, median (IQR), cm3 | 41.52 (20.69–63.76) | 40.38 (20.08–62.69) | 41.17 (20.91–63.33) | 0.597 |
IQR, interquartile range; pKPS, preoperative Karnofsky performance status; pEO, preoperative epilepsy occurrence; LGG, lower grade glioma; GBM, glioblastoma multiforme; SIRI, systemic inflammation response index; PTE, peritumoral edema; P is obtained from the Kruskal–Wallis H-test and the χ2-test.
Figure 1Variables selection methods. (A,B) The selection of variables using the BSR method. (C) The LASSO coefficient profile of 12 GBM-related variables in primary cohort. (D) 10-fold cross-validation (CV) for tuning parameter (λ) selection. (E,F) The FSR method was used to select variables. (G–I) The ROC curves of GBM in primary cohort and two validation cohorts, respectively. BIC, Bayesian information criterion; GBM, glioblastoma multiforme; BSR, best subsets regression; FSR, forward stepwise regression; BMI, body mass index; SIRI, systemic inflammation response index; pEO, preoperative epilepsy occurrence; pKPS, preoperative Karnofsky performance status; PTE, peritumoral edema.
Risk factors for GBM in primary cohort.
| Intercept | −5.40 | – | – | −6.33 | – | – | −7.36 | – | – |
| Age | 0.07 | 1.07 (1.04–1.11) | <0.01 | 0.07 | 1.07 (1.04–1.11) | <0.01 | 0.07 | 1.07 (1.04–1.11) | <0.01 |
| pKPS | −2.47 | 0.09 (0.02–0.31) | <0.01 | −2.18 | 0.11 (0.30–0.44) | <0.01 | −2.22 | 0.11 (0.03–0.38) | <0.01 |
| pEO | −1.87 | 0.15 (0.05–0.50) | <0.05 | −2.01 | 0.13 (0.04–0.45) | <0.01 | – | – | – |
| SIRI | – | – | – | 0.48 | 1.62 (1.10–2.39) | <0.05 | 0.43 | 1.53 (1.06–2.22) | <0.01 |
| Tumor volume | 0.07 | 1.08 (1.05–1.11) | <0.01 | 0.07 | 1.08 (1.04–1.11) | <0.01 | 0.07 | 1.07 (1.04–1.10) | <0.01 |
| Annular enhancement | 1.62 | 5.03 (1.79–14.14) | <0.01 | 1.64 | 5.17 (1.80–14.83) | <0.01 | 1.39 | 4.02 (1.53–10.54) | <0.01 |
| PTE | 0.02 | 1.02 (1.01–1.03) | <0.05 | 0.02 | 1.02 (1.01–1.04) | <0.05 | 0.02 | 1.02 (1.01–1.03) | <0.05 |
| Tumor necrosis volume | 0.09 | 1.09 (1.03–1.17) | <0.01 | 0.09 | 1.09 (1.03–1.16) | <0.05 | 0.09 | 1.09 (1.03–1.15) | <0.01 |
| C1-index | 0.114 | C2-index | 0.244 | C3-index | 0.471 | ||||
| Primary cohort | 0.815 | 0.894 | 0.839 | ||||||
| Internal validation cohort | 0.824 | 0.899 | 0.879 | ||||||
| External validation cohort | 0.793 | 0.915 | 0.851 | ||||||
| AIC1 | AIC2 | AIC3 | |||||||
| 179.63 | 173.71 | 182.51 | |||||||
| IDI (2 vs. 1) | IDI (2 vs. 3) | ||||||||
| <0.01 | <0.05 | ||||||||
| 11.89% | 9.14% | ||||||||
pKPS, preoperative Karnofsky performance status; pEO, preoperative epilepsy occurrence; SIRI, systemic inflammation response index; P is obtained from the multivariable logistic regression; β is regression coefficient; PTE, peritumoral edema; OR, odds ratio; AIC, the Akaike information criterion; C-index, the concordance index (the area under curve in logistic regression analysis); IDI, the integrated discrimination improvement (model 2 vs. model 1, model 2 vs. model 3).
Figure 2GBM-related nomogram prediction score. GBM-related nomogram was constructed to preoperatively predict GBM for glioma patients, with the age, pKPS, annular enhancement, tumor necrosis volume, pEO, tumor volume, SIRI and PTE. The nomogram showed the probability of having GBM in a randomized patient with a pathological diagnosis of GBM. SIRI, systemic inflammation response index; pEO, preoperative epilepsy occurrence; pKPS, preoperative Karnofsky performance status; PTE, peritumoral edema. *P < 0.05, **P < 0.01, ***P < 0.001.
Figure 3The Calibration curves of three prediction models. (A) The Calibration curves of three prediction models in primary cohort. (B) The Calibration curves of three prediction models in internal validation cohort. (C) The Calibration curves of three prediction models in primary cohort in external cohort.
Figure 4Decision curve analysis of three prediction models. (A) The DCA curves of three prediction models in primary cohort. (B) The DCA curves of three prediction models in internal validation cohort. (C) The DCA curves of three prediction models in primary cohort in external cohort.