Literature DB >> 33185970

Communal living: glycan utilization by the human gut microbiota.

Jonathon A Briggs1, Julie M Grondin1, Harry Brumer1,2,3,4.   

Abstract

Our lower gastrointestinal tract plays host to a vast consortium of microbes, known as the human gut microbiota (HGM). The HGM thrives on a complex and diverse range of glycan structures from both dietary and host sources, the breakdown of which requires the concerted action of cohorts of carbohydrate-active enzymes (CAZymes), carbohydrate-binding proteins, and transporters. The glycan utilization profile of individual taxa, whether 'specialist' or 'generalist', is dictated by the number and functional diversity of these glycan utilization systems. Furthermore, taxa in the HGM may either compete or cooperate in glycan deconstruction, thereby creating a complex ecological web spanning diverse nutrient niches. As a result, our diet plays a central role in shaping the composition of the HGM. This review presents an overview of our current understanding of glycan utilization by the HGM on three levels: (i) molecular mechanisms of individual glycan deconstruction and uptake by key bacteria, (ii) glycan-mediated microbial interactions, and (iii) community-scale effects of dietary changes. Despite significant recent advancements, there remains much to be discovered regarding complex glycan metabolism in the HGM and its potential to affect positive health outcomes.
© 2020 Society for Applied Microbiology and John Wiley & Sons Ltd.

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Year:  2020        PMID: 33185970     DOI: 10.1111/1462-2920.15317

Source DB:  PubMed          Journal:  Environ Microbiol        ISSN: 1462-2912            Impact factor:   5.491


  8 in total

Review 1.  Carbohydrate-active enzymes (CAZymes) in the gut microbiome.

Authors:  Jacob F Wardman; Rajneesh K Bains; Peter Rahfeld; Stephen G Withers
Journal:  Nat Rev Microbiol       Date:  2022-03-28       Impact factor: 78.297

Review 2.  Cell Surface Xyloglucan Recognition and Hydrolysis by the Human Gut Commensal Bacteroides uniformis.

Authors:  Julie M Grondin; Guillaume Déjean; Filip Van Petegem; Harry Brumer
Journal:  Appl Environ Microbiol       Date:  2021-11-03       Impact factor: 5.005

3.  Sticking to starch.

Authors:  Harry Brumer
Journal:  J Biol Chem       Date:  2022-05-18       Impact factor: 5.486

Review 4.  Structure and evolution of the bifidobacterial carbohydrate metabolism proteins and enzymes.

Authors:  Shinya Fushinobu; Maher Abou Hachem
Journal:  Biochem Soc Trans       Date:  2021-04-30       Impact factor: 5.407

Review 5.  Positive biofilms to guide surface microbial ecology in livestock buildings.

Authors:  Virgile Guéneau; Julia Plateau-Gonthier; Ludovic Arnaud; Jean-Christophe Piard; Mathieu Castex; Romain Briandet
Journal:  Biofilm       Date:  2022-04-19

6.  Technical pipeline for screening microbial communities as a function of substrate specificity through fluorescent labelling.

Authors:  Shaun Leivers; Leidy Lagos; Philipp Garbers; Sabina Leanti La Rosa; Bjørge Westereng
Journal:  Commun Biol       Date:  2022-05-11

7.  Genomic reconstruction of short-chain fatty acid production by the human gut microbiota.

Authors:  Maria S Frolova; Inna A Suvorova; Stanislav N Iablokov; Sergei N Petrov; Dmitry A Rodionov
Journal:  Front Mol Biosci       Date:  2022-08-11

8.  Tracking the transition to agriculture in Southern Europe through ancient DNA analysis of dental calculus.

Authors:  Claudio Ottoni; Dušan Borić; Olivia Cheronet; Vitale Sparacello; Irene Dori; Alfredo Coppa; Dragana Antonović; Dario Vujević; T Douglas Price; Ron Pinhasi; Emanuela Cristiani
Journal:  Proc Natl Acad Sci U S A       Date:  2021-08-10       Impact factor: 11.205

  8 in total

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