Literature DB >> 33163994

Learning a Gradient Guidance for Spatially Isotropic MRI Super-Resolution Reconstruction.

Yao Sui1,2, Onur Afacan1,2, Ali Gholipour1,2, Simon K Warfield1,2.   

Abstract

In MRI practice, it is inevitable to appropriately balance between image resolution, signal-to-noise ratio (SNR), and scan time. It has been shown that super-resolution reconstruction (SRR) is effective to achieve such a balance, and has obtained better results than direct high-resolution (HR) acquisition, for certain contrasts and sequences. The focus of this work was on constructing images with spatial resolution higher than can be practically obtained by direct Fourier encoding. A novel learning approach was developed, which was able to provide an estimate of the spatial gradient prior from the low-resolution (LR) inputs for the HR reconstruction. By incorporating the anisotropic acquisition schemes, the learning model was trained over the LR images themselves only. The learned gradients were integrated as prior knowledge into a gradient-guided SRR model. A closed-form solution to the SRR model was developed to obtain the HR reconstruction. Our approach was assessed on the simulated data as well as the data acquired on a Siemens 3T MRI scanner containing 45 MRI scans from 15 subjects. The experimental results demonstrated that our approach led to superior SRR over state-of-the-art methods, and obtained better images at lower or the same cost in scan time than direct HR acquisition.

Entities:  

Keywords:  Deep neural networks; MRI; Super-resolution

Year:  2020        PMID: 33163994      PMCID: PMC7643753          DOI: 10.1007/978-3-030-59713-9_14

Source DB:  PubMed          Journal:  Med Image Comput Comput Assist Interv


  15 in total

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Authors:  K P Pruessmann; M Weiger; M B Scheidegger; P Boesiger
Journal:  Magn Reson Med       Date:  1999-11       Impact factor: 4.668

2.  Motion correction with PROPELLER MRI: application to head motion and free-breathing cardiac imaging.

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Journal:  Magn Reson Med       Date:  1999-11       Impact factor: 4.668

3.  Super-resolution methods in MRI: can they improve the trade-off between resolution, signal-to-noise ratio, and acquisition time?

Authors:  Esben Plenge; Dirk H J Poot; Monique Bernsen; Gyula Kotek; Gavin Houston; Piotr Wielopolski; Louise van der Weerd; Wiro J Niessen; Erik Meijering
Journal:  Magn Reson Med       Date:  2012-02-01       Impact factor: 4.668

4.  Robust super-resolution volume reconstruction from slice acquisitions: application to fetal brain MRI.

Authors:  Ali Gholipour; Judy A Estroff; Simon K Warfield
Journal:  IEEE Trans Med Imaging       Date:  2010-06-07       Impact factor: 10.048

5.  General and efficient super-resolution method for multi-slice MRI.

Authors:  D H J Poot; V Van Meir; J Sijbers
Journal:  Med Image Comput Comput Assist Interv       Date:  2010

6.  Improvements in shape-from-focus for holographic reconstructions with regard to focus operators, neighborhood-size, and height value interpolation.

Authors:  Andrea Thelen; Susanne Frey; Sven Hirsch; Peter Hering
Journal:  IEEE Trans Image Process       Date:  2009-01       Impact factor: 10.856

7.  Image Super-Resolution Using Deep Convolutional Networks.

Authors:  Chao Dong; Chen Change Loy; Kaiming He; Xiaoou Tang
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2016-02       Impact factor: 6.226

8.  Method for retrospective estimation of natural head movement during structural MRI.

Authors:  Domenico Zacà; Uri Hasson; Ludovico Minati; Jorge Jovicich
Journal:  J Magn Reson Imaging       Date:  2018-02-02       Impact factor: 4.813

9.  Super-resolution musculoskeletal MRI using deep learning.

Authors:  Akshay S Chaudhari; Zhongnan Fang; Feliks Kogan; Jeff Wood; Kathryn J Stevens; Eric K Gibbons; Jin Hyung Lee; Garry E Gold; Brian A Hargreaves
Journal:  Magn Reson Med       Date:  2018-03-26       Impact factor: 4.668

10.  T1-weighted in vivo human whole brain MRI dataset with an ultrahigh isotropic resolution of 250 μm.

Authors:  Falk Lüsebrink; Alessandro Sciarra; Hendrik Mattern; Renat Yakupov; Oliver Speck
Journal:  Sci Data       Date:  2017-03-14       Impact factor: 6.444

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  4 in total

1.  Gradient-Guided Isotropic MRI Reconstruction from Anisotropic Acquisitions.

Authors:  Yao Sui; Onur Afacan; Camilo Jaimes; Ali Gholipour; Simon K Warfield
Journal:  IEEE Trans Comput Imaging       Date:  2021-11-17

2.  MRI Super-Resolution Through Generative Degradation Learning.

Authors:  Yao Sui; Onur Afacan; Ali Gholipour; Simon K Warfield
Journal:  Med Image Comput Comput Assist Interv       Date:  2021-09-21

3.  Scan-Specific Generative Neural Network for MRI Super-Resolution Reconstruction.

Authors:  Yao Sui; Onur Afacan; Camilo Jaimes; Ali Gholipour; Simon K Warfield
Journal:  IEEE Trans Med Imaging       Date:  2022-06-01       Impact factor: 11.037

4.  Fast and High-Resolution Neonatal Brain MRI Through Super-Resolution Reconstruction From Acquisitions With Variable Slice Selection Direction.

Authors:  Yao Sui; Onur Afacan; Ali Gholipour; Simon K Warfield
Journal:  Front Neurosci       Date:  2021-06-16       Impact factor: 4.677

  4 in total

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