| Literature DB >> 33151979 |
Marta Bolgan1,2,3, Beatriz P Pereira1,2, Aurora Crucianelli3, Constantinos C Mylonas4, Pedro Pousão-Ferreira5, Eric Parmentier3, Paulo J Fonseca6, M Clara P Amorim1,2.
Abstract
Passive Acoustic Monitoring (PAM) is a non-intrusive and cost-effective method capable of providing high-resolution, long-term information on the status and health of vocal populations and communities. To successfully monitor the same species over wide geographical and temporal scales, it is necessary to characterise the range of sound variability, as well as the consistency of sound features between populations. The meagre (Argyrosomus regius, Asso 1801) is an interesting case study because recent investigations suggest a wider vocal repertoire than previously described. In this study, meagre vocalizations were recorded and analysed from a variety of settings, ranging from rearing facilities to wild populations to provide a comprehensive characterisation of its vocal repertoire, while investigating the consistency of spawning sound features between populations. All sounds presented a similar acoustic structure in their basic unit (i.e. the pulse), while an important variability was found in the number of pulses; the meagre can emit sounds made of one single pulse or many pulses (up to more than 100). High level of overlap in the Principal Component Analysis made difficult to differentiate sound type clusters. Despite this, two sound types were identifiable: knocks (sounds from 1 to 3 pulses) and long grunts (sounds with more than 29 pulses). Discriminant Analysis carried out on PCA residuals showed that knock had the highest proportion of correct placement (92% of the observations correctly placed) followed by long grunts (80%). All other previously described sound types (intermediate grunt, short grunt and disturbance sounds) could not be separated and presented low levels of correct placement, suggesting that care should be taken when defining these as independent sound types. Finally, acoustic features consistency was found in meagre grunts emitted by different populations during spawning nights; statistical differences could be explained by recording settings and fish conditions. The results of this study provide important information for fostering PAM programs of wild meagre populations, while contributing to the discussion around the definition of fish sound types in vocal fish communities. Studies of this kind, which evaluate both variability and consistency of sound features, are of fundamental importance for maximising PAM efforts in the wild, at both the specific and the community level.Entities:
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Year: 2020 PMID: 33151979 PMCID: PMC7643951 DOI: 10.1371/journal.pone.0241792
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Fig 1Oscillograms and spectrograms representing the variability of Argyrosomus regius vocal repertoire: a) pulse waveform (a1 = pulse waveform of 1 pulse knock, see rectangle in b; a2 = pulse waveform within a long grunt, see rectangle in g); b) knocks (1, 2 and 3 pulses); c) short grunt (4 pulses); d) short grunt (6 pulses); e) intermediate grunt (11 pulses) with a typical pattern in amplitude modulation; f) intermediate grunt (24 pulses); g) long grunt (44 pulses) with limited amplitude modulation; h) long grunt (87 pulses) and i) long grunt (100 pulses) with a typical pattern in amplitude modulation. Sampling frequency 4 kHz, 64 point FFT (frequency resolution: 63 Hz), Hamming window, 50% overlap.
Fig 2a) Number of pulses (proportion of sounds, %) in Argyrosomus regius sounds (all sounds analysed as part of this study, i.e. N = 741); b) pulse period succession in grunts having less than 20 pulses and c) pulse period succession in grunts having more than 20 pulses (the box on the upper right of panel c represents a zoom on the first 20 pulses).
Descriptive statistics (mean, standard deviation SD and coefficient of variation CV) of sound features characterising the calls emitted by the meagre Argyrosomus regius.
All sounds analysed are pooled together. Q3 Freq = Q3 frequency; Peak Freq = peak frequency; Q1 Freq = Q1 frequency.
| Context | Disturbance | Advertisement | ||||
|---|---|---|---|---|---|---|
| Sound category | Disturbance | Knock | Short grunt | Intermediate grunt | Long grunt | |
| Sample size | 46 | 50 | 50 | 270 | 325 | |
| Mean | 373.1 | 566.8 | 478.6 | 416.4 | 413.7 | |
| S.D. | 88.7 | 45.0 | 127.9 | 106.9 | 98.7 | |
| C.V. | 23.8 | 7.9 | 26.7 | 25.7 | 23.8 | |
| Mean | 232.2 | 437.7 | 331.0 | 262.8 | 231.6 | |
| S.D. | 73.3 | 112.6 | 158.0 | 125.3 | 125.4 | |
| C.V. | 31.6 | 25.7 | 47.7 | 47.7 | 54.1 | |
| Mean | 220.3 | 375.6 | 254.5 | 213.6 | 197.8 | |
| S.D. | 60.7 | 58.7 | 86.2 | 66.1 | 87.5 | |
| C.V. | 27.6 | 15.6 | 33.8 | 30.9 | 44.2 | |
| Mean | 169.6 | 79.3 | 126.8 | 271.6 | 957.3 | |
| S.D. | 72.8 | 161.6 | 134.6 | 113.7 | 323.1 | |
| C.V. | 42.9 | 203.7 | 106.2 | 41.8 | 33.8 | |
| Mean | 11.6 | 2.1 | 5.1 | 14.8 | 51.2 | |
| S.D. | 3.1 | 0.7 | 0.8 | 5.7 | 17.9 | |
| C.V. | 27.1 | 34.9 | 15.8 | 38.5 | 35.0 | |
| Mean | 14.5 | 29.4 | 18.3 | 17.8 | 18.9 | |
| S.D. | 2.9 | 12.6 | 4.0 | 3.2 | 2.2 | |
| C.V. | 19.7 | 43.0 | 21.7 | 17.9 | 11.9 | |
Principal Component Analysis (PCA) carried out on all Argyrosomus regius sounds; relevant coefficients, eigenvalues, percentage of the variance and cumulative percentage of the variance explained by the first five PCA.
Q3 Freq = Q3 frequency; Peak Freq = peak frequency; Q1 Freq = Q1 frequency. The main contributors to the first two components are highlighted.
| Variable | PC1 | PC2 | PC3 | PC4 | PC5 |
|---|---|---|---|---|---|
| 0.443 | 0.075 | -0.37 | -0.813 | -0.02 | |
| 0.015 | -0.228 | 0.425 | -0.676 | ||
| 0.015 | -0.109 | 0.347 | 0.731 | ||
| -0.269 | -0.485 | 0.148 | 0.053 | ||
| 0.298 | 0.751 | -0.126 | -0.075 | ||
| 2.4 | 0.9177 | 0.845 | 0.6155 | 0.214 | |
| 48.2 | 18.4 | 16.9 | 12.3 | 4.3 | |
| 48.2 | 66.5 | 83.4 | 95.7 | 100 |
Fig 3Score plot of the Principal Component Analysis (PC1 and PC2) carried out on all Argyrosomus regius sounds analysed as part of this study (N = 741).
Variables: Q3 Frequency, peak frequency, Q1 frequency, number of pulses and pulse period (correlation matrix). a) Colour coding indicates sound types categories; b) colour coding indicates recording settings and conditions.
Classification summary of the discriminant function analysis (linear) carried out on the first five PCA (N sounds = 741).
| True groups | |||||
|---|---|---|---|---|---|
| Put into groups | Disturbance sounds | Intermediate grunts | Knocks | Long grunts | Short grunts |
| Disturbance sounds | 18 | 75 | 0 | 45 | 4 |
| Intermediate grunts | 18 | 108 | 0 | 16 | 12 |
| Knocks | 0 | 2 | 45 | 0 | 4 |
| Long grunts | 3 | 11 | 0 | 259 | 1 |
| Short grunts | 7 | 74 | 4 | 2 | 30 |
| 46 | 270 | 49 | 325 | 51 | |
| 18 | 108 | 45 | 259 | 30 | |
| 0.391 | 0.400 | 0.918 | 0.802 | 0.588 | |
Results of the sequence analysis carried out on Argyrosomus regius sound categories.
Significant transitions are highlighted (level of significance = 0.001).
| 151.3379 | -16.0627 | -80.0244 | -55.2508 | ||
| -16.5335 | 23.87885 | 7.139214 | -14.4846 | ||
| -77.0956 | 4.225292 | 133.9692 | -61.0988 | ||
| -57.7088 | -12.0414 | -61.084 | 130.8342 | ||
| 15.12131 | |||||
| 14.7493 | 1.651558 | 8.568792 | |||
| 0.642782 | |||||
| 6.890991 | 35.17261 |
Fig 4Flow diagram of sound sequences exhibited by Argyrosomus regius (X2 = 1198.7, df = 9, p.value< 0.001).
Red arrows indicate positive transitions that were highly significant (p.value< 0.001). Blue arrows indicate significant negative transitions (p.value< 0.001). Arrows are sized according to the chi-square residual values.
Results of the one-way analysis of covariance (ANCOVA) carried out for comparing grunts emitted by Argyrosomus regius during spawning nights in the two aquaculture facilities (IPMA and HCMR) while controlling for the effect of water temperature (covariate).
SS = Sum of Squares; MS = Mean Square; Df = degree of freedom. Q3 Freq = Q3 frequency; Peak Freq = peak frequency; Q1 Freq = Q1 frequency.
| Q3 Freq (Hz) | Peak Freq (Hz) | Q1 Freq (Hz) | Duration (ms) | Pulse period (ms) | Number of pulses | |
|---|---|---|---|---|---|---|
| 1 | 1 | 1 | 1 | 1 | 1 | |
| 236 | 236 | 236 | 236 | 236 | 236 | |
| 0.148 | 2.499 | 1.781 | 1.015 | 0.320 | 1.754 | |
| 0.700 | 0.115 | 0.183 | 0.315 | 0.572 | 0.187 | |
| 1 | 1 | 1 | 1 | 1 | 1 | |
| 8 | 8 | 8 | 8 | 8 | 8 | |
| 0.007 | 1.564 | 0.014 | 0.011 | 2.208 | 0.692 | |
| 0.934 | 0.246 | 0.908 | 0.918 | 0.176 | 0.430 | |
| 1 | 1 | 1 | 1 | 1 | 1 | |
| 81 | 81 | 81 | 81 | 81 | 81 | |
| 7.40 | 0.31 | 0.60 | 0.40 | 0.21 | 3.05 | |
| 0.58 | 0.44 | 0.53 | 0.65 | 0.08 | ||
| 1 | 1 | 1 | 1 | 1 | 1 | |
| 148 | 148 | 148 | 148 | 148 | 148 | |
| 4.098 | 0.384 | 1.016 | 16.378 | 32.503 | 56.070 | |
| 0.536 | 0.315 | |||||