Literature DB >> 33151407

The gut mycobiome: a novel player in chronic liver diseases.

Lu Jiang1,2, Peter Stärkel3, Jian-Gao Fan4, Derrick Eugene Fouts5, Petra Bacher6,7, Bernd Schnabl8,9.   

Abstract

The human gut microbiome (bacteria, fungi, viruses, and archaea) is a complex and diverse ecosystem. It plays an important role in human health, but is involved in several intestinal and extraintestinal diseases. Most research to date has focused on the role of bacteria, while studies focusing on fungi (also referred to as "mycobiome" or "fungome") are still in its infancy. In this review, we focus on the existing literature available about the gut mycobiome with an emphasis on compositional mycobiome changes associated with liver diseases, the impact on pathogenesis of disease, and its potential use as therapeutic targets. We also provide insights into current methodologies of studying mycobiome, and we highlight the interkingdom interactions in the context of disease and how they affect health of the host. Herein, by focusing on the gut mycobiome, this review provides novel insights and directions for liver research.

Entities:  

Keywords:  Alcohol-associated liver disease; Fungi; Fungome; Microbiome; Non-alcoholic fatty liver disease

Year:  2020        PMID: 33151407      PMCID: PMC7819863          DOI: 10.1007/s00535-020-01740-5

Source DB:  PubMed          Journal:  J Gastroenterol        ISSN: 0944-1174            Impact factor:   7.527


  123 in total

Review 1.  Management of alcoholic hepatitis.

Authors:  Philippe Mathurin; Michael R Lucey
Journal:  J Hepatol       Date:  2012       Impact factor: 25.083

Review 2.  Insights into human antifungal immunity from primary immunodeficiencies.

Authors:  Donald C Vinh
Journal:  Lancet Infect Dis       Date:  2011-10       Impact factor: 25.071

3.  Anti-Saccharomyces cerevisiae antibodies (ASCA) and autoimmune liver diseases.

Authors:  P Muratori; L Muratori; M Guidi; S Maccariello; G Pappas; R Ferrari; P Gionchetti; M Campieri; F B Bianchi
Journal:  Clin Exp Immunol       Date:  2003-06       Impact factor: 4.330

4.  Th17 Cell Induction by Adhesion of Microbes to Intestinal Epithelial Cells.

Authors:  Koji Atarashi; Takeshi Tanoue; Minoru Ando; Nobuhiko Kamada; Yuji Nagano; Seiko Narushima; Wataru Suda; Akemi Imaoka; Hiromi Setoyama; Takashi Nagamori; Eiji Ishikawa; Tatsuichiro Shima; Taeko Hara; Shoichi Kado; Toshi Jinnohara; Hiroshi Ohno; Takashi Kondo; Kiminori Toyooka; Eiichiro Watanabe; Shin-Ichiro Yokoyama; Shunji Tokoro; Hiroshi Mori; Yurika Noguchi; Hidetoshi Morita; Ivaylo I Ivanov; Tsuyoshi Sugiyama; Gabriel Nuñez; J Gray Camp; Masahira Hattori; Yoshinori Umesaki; Kenya Honda
Journal:  Cell       Date:  2015-09-24       Impact factor: 41.582

5.  Taxonomic reliability of DNA sequences in public sequence databases: a fungal perspective.

Authors:  R Henrik Nilsson; Martin Ryberg; Erik Kristiansson; Kessy Abarenkov; Karl-Henrik Larsson; Urmas Kõljalg
Journal:  PLoS One       Date:  2006-12-20       Impact factor: 3.240

6.  The gut mycobiome of the Human Microbiome Project healthy cohort.

Authors:  Andrea K Nash; Thomas A Auchtung; Matthew C Wong; Daniel P Smith; Jonathan R Gesell; Matthew C Ross; Christopher J Stewart; Ginger A Metcalf; Donna M Muzny; Richard A Gibbs; Nadim J Ajami; Joseph F Petrosino
Journal:  Microbiome       Date:  2017-11-25       Impact factor: 14.650

7.  Consistent alterations in faecal microbiomes of patients with primary sclerosing cholangitis independent of associated colitis.

Authors:  Malte Rühlemann; Timur Liwinski; Femke-Anouska Heinsen; Corinna Bang; Roman Zenouzi; Martin Kummen; Louise Thingholm; Marie Tempel; Wolfgang Lieb; Tom Karlsen; Ansgar Lohse; Johannes Hov; Gerald Denk; Frank Lammert; Marcin Krawczyk; Christoph Schramm; Andre Franke
Journal:  Aliment Pharmacol Ther       Date:  2019-06-28       Impact factor: 8.171

8.  Host-microbe interactions have shaped the genetic architecture of inflammatory bowel disease.

Authors:  Luke Jostins; Stephan Ripke; Rinse K Weersma; Richard H Duerr; Dermot P McGovern; Ken Y Hui; James C Lee; L Philip Schumm; Yashoda Sharma; Carl A Anderson; Jonah Essers; Mitja Mitrovic; Kaida Ning; Isabelle Cleynen; Emilie Theatre; Sarah L Spain; Soumya Raychaudhuri; Philippe Goyette; Zhi Wei; Clara Abraham; Jean-Paul Achkar; Tariq Ahmad; Leila Amininejad; Ashwin N Ananthakrishnan; Vibeke Andersen; Jane M Andrews; Leonard Baidoo; Tobias Balschun; Peter A Bampton; Alain Bitton; Gabrielle Boucher; Stephan Brand; Carsten Büning; Ariella Cohain; Sven Cichon; Mauro D'Amato; Dirk De Jong; Kathy L Devaney; Marla Dubinsky; Cathryn Edwards; David Ellinghaus; Lynnette R Ferguson; Denis Franchimont; Karin Fransen; Richard Gearry; Michel Georges; Christian Gieger; Jürgen Glas; Talin Haritunians; Ailsa Hart; Chris Hawkey; Matija Hedl; Xinli Hu; Tom H Karlsen; Limas Kupcinskas; Subra Kugathasan; Anna Latiano; Debby Laukens; Ian C Lawrance; Charlie W Lees; Edouard Louis; Gillian Mahy; John Mansfield; Angharad R Morgan; Craig Mowat; William Newman; Orazio Palmieri; Cyriel Y Ponsioen; Uros Potocnik; Natalie J Prescott; Miguel Regueiro; Jerome I Rotter; Richard K Russell; Jeremy D Sanderson; Miquel Sans; Jack Satsangi; Stefan Schreiber; Lisa A Simms; Jurgita Sventoraityte; Stephan R Targan; Kent D Taylor; Mark Tremelling; Hein W Verspaget; Martine De Vos; Cisca Wijmenga; David C Wilson; Juliane Winkelmann; Ramnik J Xavier; Sebastian Zeissig; Bin Zhang; Clarence K Zhang; Hongyu Zhao; Mark S Silverberg; Vito Annese; Hakon Hakonarson; Steven R Brant; Graham Radford-Smith; Christopher G Mathew; John D Rioux; Eric E Schadt; Mark J Daly; Andre Franke; Miles Parkes; Severine Vermeire; Jeffrey C Barrett; Judy H Cho
Journal:  Nature       Date:  2012-11-01       Impact factor: 49.962

9.  The lung mycobiome: an emerging field of the human respiratory microbiome.

Authors:  Linh D N Nguyen; Eric Viscogliosi; Laurence Delhaes
Journal:  Front Microbiol       Date:  2015-02-13       Impact factor: 5.640

10.  Fungal microbiota dysbiosis in IBD.

Authors:  Harry Sokol; Valentin Leducq; Hugues Aschard; Hang-Phuong Pham; Sarah Jegou; Cecilia Landman; David Cohen; Giuseppina Liguori; Anne Bourrier; Isabelle Nion-Larmurier; Jacques Cosnes; Philippe Seksik; Philippe Langella; David Skurnik; Mathias L Richard; Laurent Beaugerie
Journal:  Gut       Date:  2016-02-03       Impact factor: 23.059

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  11 in total

Review 1.  Roles for the mycobiome in liver disease.

Authors:  Suling Zeng; Bernd Schnabl
Journal:  Liver Int       Date:  2022-01-17       Impact factor: 5.828

2.  Intestinal Barrier Dysfunction in Fatty Liver Disease: Roles of Microbiota, Mucosal Immune System, and Bile Acids.

Authors:  Biki Gupta; Ravi Rai; Michael Oertel; Reben Raeman
Journal:  Semin Liver Dis       Date:  2022-06-23       Impact factor: 6.512

3.  Spontaneous Fungal Ascites Infection in Patients with Cirrhosis: An Analysis of 10 Cases.

Authors:  Beiling Li; Chao Yang; Zhiping Qian; Yan Huang; Xianbo Wang; Guotao Zhong; Jinjun Chen
Journal:  Infect Dis Ther       Date:  2021-03-11

4.  Fecal Fungal Dysbiosis in Chinese Patients With Alzheimer's Disease.

Authors:  Zongxin Ling; Manlian Zhu; Xia Liu; Li Shao; Yiwen Cheng; Xiumei Yan; Ruilai Jiang; Shaochang Wu
Journal:  Front Cell Dev Biol       Date:  2021-01-28

Review 5.  Promising diagnostic biomarkers of nonalcoholic fatty liver disease and nonalcoholic steatohepatitis: From clinical proteomics to microbiome.

Authors:  Carolina Castillo-Castro; Alexandro José Martagón-Rosado; Rocio Ortiz-Lopez; Luis Felipe Garrido-Treviño; Melissa Villegas-Albo; Francisco Javier Bosques-Padilla
Journal:  World J Hepatol       Date:  2021-11-27

Review 6.  Significance of the Gut Microbiome for Viral Diarrheal and Extra-Intestinal Diseases.

Authors:  Ulrich Desselberger
Journal:  Viruses       Date:  2021-08-12       Impact factor: 5.048

Review 7.  Host Factors in Dysregulation of the Gut Barrier Function during Alcohol-Associated Liver Disease.

Authors:  Luca Maccioni; Isabelle A Leclercq; Bernd Schnabl; Peter Stärkel
Journal:  Int J Mol Sci       Date:  2021-11-24       Impact factor: 6.208

8.  Could gut mycobiome play a role in NAFLD pathogenesis? Insights and therapeutic perspectives.

Authors:  Dimitrios Fotis; Junli Liu; Maria Dalamaga
Journal:  Metabol Open       Date:  2022-03-14

Review 9.  The Gut-Liver Axis in Cholestatic Liver Diseases.

Authors:  Andreas Blesl; Vanessa Stadlbauer
Journal:  Nutrients       Date:  2021-03-21       Impact factor: 5.717

10.  Dynamic Changes of the Fungal Microbiome in Alcohol Use Disorder.

Authors:  Phillipp Hartmann; Sonja Lang; Suling Zeng; Yi Duan; Xinlian Zhang; Yanhan Wang; Marina Bondareva; Andrey Kruglov; Derrick E Fouts; Peter Stärkel; Bernd Schnabl
Journal:  Front Physiol       Date:  2021-07-19       Impact factor: 4.755

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