Literature DB >> 33144328

The nuclear factor CECR2 promotes somatic cell reprogramming by reorganizing the chromatin structure.

Linlin Wu1, Guoqing Zhao2, Shuyang Xu3, Junqi Kuang4, Jin Ming4, Guangmin Wu5, Tao Wang6, Bo Wang6, Ping Zhu7, Duanqing Pei8, Jing Liu9.   

Abstract

Somatic cells can be reprogrammed into pluripotent stem cells with a minimal set of defined factors, Oct3/4, Sox2, Klf4, and c-Myc, also known as OKSM, although this reprogramming is somewhat inefficient. Recent work has identified other nuclear factors, including SALL4, that can synergize with the OSK factors to improve reprogramming dynamics, but the specific role of each of these factors remains poorly understood. In this study, we sought to learn more about the role of SALL4. We observed that SALL4 was the most significant factor in promoting OKS-induced reprogramming. To look for molecules downstream of SALL4, we screened a set of putative targets to determine whether they could promote OKS-induced reprogramming. We identified CECR2, a multidomain nuclear factor and histone acetyl-lysine reader, as a SALL4 effector. Mechanistically, we determined that SALL4 activates Cecr2 expression by directly binding to its promotor region. CECR2 in turn promotes reprogramming by forming a chromatin remodeling complex; this complex contained the SWI/SNF family member SMARCA1 and was dependent on CECR2's DTT domain. In combination, our findings suggest that CECR2 is a novel reprogramming factor and works through a protein network to overcome epigenetic barriers during reprogramming.
Copyright © 2020 The Authors. Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  CECR2; DDT domain; SALL4; chromatin remodeling; reprogramming

Mesh:

Substances:

Year:  2020        PMID: 33144328      PMCID: PMC7948406          DOI: 10.1074/jbc.RA120.014598

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  31 in total

1.  Chromatin-Remodeling Components of the BAF Complex Facilitate Reprogramming.

Authors:  Nishant Singhal; Johannes Graumann; Guangming Wu; Marcos J Araúzo-Bravo; Dong Wook Han; Boris Greber; Luca Gentile; Matthias Mann; Hans R Schöler
Journal:  Cell       Date:  2010-06-11       Impact factor: 41.582

2.  BMPs functionally replace Klf4 and support efficient reprogramming of mouse fibroblasts by Oct4 alone.

Authors:  Jiekai Chen; Jing Liu; Jiaqi Yang; You Chen; Jing Chen; Su Ni; Hong Song; Lingwen Zeng; Ke Ding; Duanqing Pei
Journal:  Cell Res       Date:  2010-12-07       Impact factor: 25.617

3.  Uniform, optimal signal processing of mapped deep-sequencing data.

Authors:  Vibhor Kumar; Masafumi Muratani; Nirmala Arul Rayan; Petra Kraus; Thomas Lufkin; Huck Hui Ng; Shyam Prabhakar
Journal:  Nat Biotechnol       Date:  2013-06-16       Impact factor: 54.908

4.  Rational optimization of reprogramming culture conditions for the generation of induced pluripotent stem cells with ultra-high efficiency and fast kinetics.

Authors:  Jiekai Chen; Jing Liu; You Chen; Jiaqi Yang; Jing Chen; He Liu; Xiangjie Zhao; Kunlun Mo; Hong Song; Lin Guo; Shilong Chu; Deping Wang; Ke Ding; Duanqing Pei
Journal:  Cell Res       Date:  2011-03-29       Impact factor: 25.617

5.  Dynamic readers for 5-(hydroxy)methylcytosine and its oxidized derivatives.

Authors:  Cornelia G Spruijt; Felix Gnerlich; Arne H Smits; Toni Pfaffeneder; Pascal W T C Jansen; Christina Bauer; Martin Münzel; Mirko Wagner; Markus Müller; Fariha Khan; H Christian Eberl; Anneloes Mensinga; Arie B Brinkman; Konstantin Lephikov; Udo Müller; Jörn Walter; Rolf Boelens; Hugo van Ingen; Heinrich Leonhardt; Thomas Carell; Michiel Vermeulen
Journal:  Cell       Date:  2013-02-21       Impact factor: 41.582

6.  Induction of pluripotent stem cells from mouse embryonic and adult fibroblast cultures by defined factors.

Authors:  Kazutoshi Takahashi; Shinya Yamanaka
Journal:  Cell       Date:  2006-08-10       Impact factor: 41.582

7.  Replacement of Oct4 by Tet1 during iPSC induction reveals an important role of DNA methylation and hydroxymethylation in reprogramming.

Authors:  Yawei Gao; Jiayu Chen; Ke Li; Tong Wu; Bo Huang; Wenqiang Liu; Xiaochen Kou; Yu Zhang; Hua Huang; Yonghua Jiang; Chao Yao; Xiaolei Liu; Zhiwei Lu; Zijian Xu; Lan Kang; Jun Chen; Hailin Wang; Tao Cai; Shaorong Gao
Journal:  Cell Stem Cell       Date:  2013-03-14       Impact factor: 24.633

8.  Vitamin C modulates TET1 function during somatic cell reprogramming.

Authors:  Jiekai Chen; Lin Guo; Lei Zhang; Haoyu Wu; Jiaqi Yang; He Liu; Xiaoshan Wang; Xiao Hu; Tianpeng Gu; Zhiwei Zhou; Jing Liu; Jiadong Liu; Hongling Wu; Shi-Qing Mao; Kunlun Mo; Yingying Li; Keyu Lai; Jing Qi; Hongjie Yao; Guangjin Pan; Guo-Liang Xu; Duanqing Pei
Journal:  Nat Genet       Date:  2013-10-27       Impact factor: 38.330

9.  Comprehensive Cell Surface Protein Profiling Identifies Specific Markers of Human Naive and Primed Pluripotent States.

Authors:  Amanda J Collier; Sarita P Panula; John Paul Schell; Peter Chovanec; Alvaro Plaza Reyes; Sophie Petropoulos; Anne E Corcoran; Rachael Walker; Iyadh Douagi; Fredrik Lanner; Peter J Rugg-Gunn
Journal:  Cell Stem Cell       Date:  2017-03-23       Impact factor: 24.633

10.  deepTools2: a next generation web server for deep-sequencing data analysis.

Authors:  Fidel Ramírez; Devon P Ryan; Björn Grüning; Vivek Bhardwaj; Fabian Kilpert; Andreas S Richter; Steffen Heyne; Friederike Dündar; Thomas Manke
Journal:  Nucleic Acids Res       Date:  2016-04-13       Impact factor: 16.971

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