Literature DB >> 33140960

Blind Resolution of Lifetime Components in Individual Pixels of Fluorescence Lifetime Images Using the Phasor Approach.

Alexander Vallmitjana1, Belén Torrado1, Alexander Dvornikov1, Suman Ranjit2, Enrico Gratton1.   

Abstract

The phasor approach is used in fluorescence lifetime imaging microscopy for several purposes, notably to calculate the metabolic index of single cells and tissues. An important feature of the phasor approach is that it is a fit-free method allowing immediate and easy to interpret analysis of images. In a recent paper, we showed that three or four intensity fractions of exponential components can be resolved in each pixel of an image by the phasor approach using simple algebra, provided the component phasors are known. This method only makes use of the rule of linear combination of phasors rather than fits. Without prior knowledge of the components and their single exponential decay times, resolution of components and fractions is much more challenging. Blind decomposition has been carried out only for cuvette experiments wherein the statistics in terms of the number of photons collected is very good. In this paper, we show that using the phasor approach and measurements of the decay at phasor harmonics 2 and 3, available using modern electronics, we could resolve the decay in each pixel of an image in live cells or mice liver tissues with two or more exponential components without prior knowledge of the values of the components. In this paper, blind decomposition is achieved using a graphical method for two components and a minimization method for three components. This specific use of the phasor approach to resolve multicomponents in a pixel enables applications where multiplexing species with different lifetimes and potentially different spectra can provide a different type of super-resolved image content.

Entities:  

Mesh:

Year:  2020        PMID: 33140960      PMCID: PMC9272785          DOI: 10.1021/acs.jpcb.0c06946

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   3.466


  35 in total

1.  Methodological considerations for global analysis of cellular FLIM/FRET measurements.

Authors:  Nur Aida Adbul Rahim; Serge Pelet; Roger D Kamm; Peter T C So
Journal:  J Biomed Opt       Date:  2012-02       Impact factor: 3.170

2.  The phasor approach to fluorescence lifetime imaging analysis.

Authors:  Michelle A Digman; Valeria R Caiolfa; Moreno Zamai; Enrico Gratton
Journal:  Biophys J       Date:  2007-11-02       Impact factor: 4.033

3.  Phasor approach to fluorescence lifetime microscopy distinguishes different metabolic states of germ cells in a live tissue.

Authors:  Chiara Stringari; Amanda Cinquin; Olivier Cinquin; Michelle A Digman; Peter J Donovan; Enrico Gratton
Journal:  Proc Natl Acad Sci U S A       Date:  2011-08-01       Impact factor: 11.205

4.  Measuring the effect of a Western diet on liver tissue architecture by FLIM autofluorescence and harmonic generation microscopy.

Authors:  Suman Ranjit; Alexander Dvornikov; Evgenia Dobrinskikh; Xiaoxin Wang; Yuhuan Luo; Moshe Levi; Enrico Gratton
Journal:  Biomed Opt Express       Date:  2017-06-01       Impact factor: 3.732

Review 5.  Energy transfer and binding competition between dyes used to enhance staining differentiation in metaphase chromosomes.

Authors:  E Sahar; S A Latt
Journal:  Chromosoma       Date:  1980       Impact factor: 4.316

6.  Interactions between pairs of DNA-binding dyes: results and implications of chromosome analysis.

Authors:  S A Latt; E Sahar; M E Eisenhard; L A Juergens
Journal:  Cytometry       Date:  1980-07

7.  Multicomponent Analysis of Phasor Plot in a Single Pixel to Calculate Changes of Metabolic Trajectory in Biological Systems.

Authors:  Suman Ranjit; Rupsa Datta; Alexander Dvornikov; Enrico Gratton
Journal:  J Phys Chem A       Date:  2019-11-05       Impact factor: 2.781

8.  Noniterative biexponential fluorescence lifetime imaging in the investigation of cellular metabolism by means of NAD(P)H autofluorescence.

Authors:  Raluca Niesner; Bülent Peker; Peter Schlüsche; Karl-Heinz Gericke
Journal:  Chemphyschem       Date:  2004-08-20       Impact factor: 3.102

9.  Time-resolved fluorescence of DAPI in solution and bound to polydeoxynucleotides.

Authors:  M L Barcellona; G Cardiel; E Gratton
Journal:  Biochem Biophys Res Commun       Date:  1990-07-16       Impact factor: 3.575

10.  Resolution of 4 components in the same pixel in FLIM images using the phasor approach.

Authors:  Alexander Vallmitjana; Alexander Dvornikov; Belen Torrado; David M Jameson; Suman Ranjit; Enrico Gratton
Journal:  Methods Appl Fluoresc       Date:  2020-04-15       Impact factor: 3.009

View more
  6 in total

1.  Phasor S-FLIM: a new paradigm for fast and robust spectral fluorescence lifetime imaging.

Authors:  Lorenzo Scipioni; Alessandro Rossetta; Giulia Tedeschi; Enrico Gratton
Journal:  Nat Methods       Date:  2021-04-15       Impact factor: 28.547

2.  Advanced Fluorescence Microscopy Methods to Study Dynamics of Fluorescent Proteins In Vivo.

Authors:  Marcela Díaz; Leonel Malacrida
Journal:  Methods Mol Biol       Date:  2023

3.  Luminescence lifetime imaging of three-dimensional biological objects.

Authors:  Ruslan I Dmitriev; Xavier Intes; Margarida M Barroso
Journal:  J Cell Sci       Date:  2021-05-07       Impact factor: 5.285

4.  Simple phasor-based deep neural network for fluorescence lifetime imaging microscopy.

Authors:  Laurent Héliot; Aymeric Leray
Journal:  Sci Rep       Date:  2021-12-13       Impact factor: 4.379

Review 5.  Linear Combination Properties of the Phasor Space in Fluorescence Imaging.

Authors:  Belén Torrado; Leonel Malacrida; Suman Ranjit
Journal:  Sensors (Basel)       Date:  2022-01-27       Impact factor: 3.576

6.  Oral N-acetylcysteine decreases IFN-γ production and ameliorates ischemia-reperfusion injury in steatotic livers.

Authors:  Jedson R Liggett; Jiman Kang; Suman Ranjit; Olga Rodriguez; Katrina Loh; Digvijay Patil; Yuki Cui; Anju Duttargi; Sang Nguyen; Britney He; Yichien Lee; Kesha Oza; Brett S Frank; DongHyang Kwon; Heng-Hong Li; Bhaskar Kallakury; Andrew Libby; Moshe Levi; Simon C Robson; Thomas M Fishbein; Wanxing Cui; Chris Albanese; Khalid Khan; Alexander Kroemer
Journal:  Front Immunol       Date:  2022-09-05       Impact factor: 8.786

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.