Literature DB >> 33136540

CA-Net: Comprehensive Attention Convolutional Neural Networks for Explainable Medical Image Segmentation.

Ran Gu, Guotai Wang, Tao Song, Rui Huang, Michael Aertsen, Jan Deprest, Sebastien Ourselin, Tom Vercauteren, Shaoting Zhang.   

Abstract

Accurate medical image segmentation is essential for diagnosis and treatment planning of diseases. Convolutional Neural Networks (CNNs) have achieved state-of-the-art performance for automatic medical image segmentation. However, they are still challenged by complicated conditions where the segmentation target has large variations of position, shape and scale, and existing CNNs have a poor explainability that limits their application to clinical decisions. In this work, we make extensive use of multiple attentions in a CNN architecture and propose a comprehensive attention-based CNN (CA-Net) for more accurate and explainable medical image segmentation that is aware of the most important spatial positions, channels and scales at the same time. In particular, we first propose a joint spatial attention module to make the network focus more on the foreground region. Then, a novel channel attention module is proposed to adaptively recalibrate channel-wise feature responses and highlight the most relevant feature channels. Also, we propose a scale attention module implicitly emphasizing the most salient feature maps among multiple scales so that the CNN is adaptive to the size of an object. Extensive experiments on skin lesion segmentation from ISIC 2018 and multi-class segmentation of fetal MRI found that our proposed CA-Net significantly improved the average segmentation Dice score from 87.77% to 92.08% for skin lesion, 84.79% to 87.08% for the placenta and 93.20% to 95.88% for the fetal brain respectively compared with U-Net. It reduced the model size to around 15 times smaller with close or even better accuracy compared with state-of-the-art DeepLabv3+. In addition, it has a much higher explainability than existing networks by visualizing the attention weight maps. Our code is available at https://github.com/HiLab-git/CA-Net.

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Mesh:

Year:  2021        PMID: 33136540     DOI: 10.1109/TMI.2020.3035253

Source DB:  PubMed          Journal:  IEEE Trans Med Imaging        ISSN: 0278-0062            Impact factor:   10.048


  14 in total

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Journal:  Diagnostics (Basel)       Date:  2022-08-07

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Journal:  Biomed Res Int       Date:  2022-05-09       Impact factor: 3.246

3.  MTPA_Unet: Multi-Scale Transformer-Position Attention Retinal Vessel Segmentation Network Joint Transformer and CNN.

Authors:  Yun Jiang; Jing Liang; Tongtong Cheng; Xin Lin; Yuan Zhang; Jinkun Dong
Journal:  Sensors (Basel)       Date:  2022-06-17       Impact factor: 3.847

4.  COVLIAS 2.0-cXAI: Cloud-Based Explainable Deep Learning System for COVID-19 Lesion Localization in Computed Tomography Scans.

Authors:  Jasjit S Suri; Sushant Agarwal; Gian Luca Chabert; Alessandro Carriero; Alessio Paschè; Pietro S C Danna; Luca Saba; Armin Mehmedović; Gavino Faa; Inder M Singh; Monika Turk; Paramjit S Chadha; Amer M Johri; Narendra N Khanna; Sophie Mavrogeni; John R Laird; Gyan Pareek; Martin Miner; David W Sobel; Antonella Balestrieri; Petros P Sfikakis; George Tsoulfas; Athanasios D Protogerou; Durga Prasanna Misra; Vikas Agarwal; George D Kitas; Jagjit S Teji; Mustafa Al-Maini; Surinder K Dhanjil; Andrew Nicolaides; Aditya Sharma; Vijay Rathore; Mostafa Fatemi; Azra Alizad; Pudukode R Krishnan; Ferenc Nagy; Zoltan Ruzsa; Mostafa M Fouda; Subbaram Naidu; Klaudija Viskovic; Mannudeep K Kalra
Journal:  Diagnostics (Basel)       Date:  2022-06-16

5.  A Novel CNN pooling layer for breast cancer segmentation and classification from thermograms.

Authors:  Esraa A Mohamed; Tarek Gaber; Omar Karam; Essam A Rashed
Journal:  PLoS One       Date:  2022-10-21       Impact factor: 3.752

6.  Automatic classification of esophageal disease in gastroscopic images using an efficient channel attention deep dense convolutional neural network.

Authors:  Wenju Du; Nini Rao; Changlong Dong; Yingchun Wang; Dingcan Hu; Linlin Zhu; Bing Zeng; Tao Gan
Journal:  Biomed Opt Express       Date:  2021-05-03       Impact factor: 3.732

7.  Deep Learning in the Classification of Stage of Liver Fibrosis in Chronic Hepatitis B with Magnetic Resonance ADC Images.

Authors:  Ziquan Zhu; Daoyan Lv; Xin Zhang; Shui-Hua Wang; Guijuan Zhu
Journal:  Contrast Media Mol Imaging       Date:  2021-12-22       Impact factor: 3.161

8.  Application of Improved U-Net Convolutional Neural Network for Automatic Quantification of the Foveal Avascular Zone in Diabetic Macular Ischemia.

Authors:  Yongan Meng; Hailei Lan; Yuqian Hu; Zailiang Chen; Pingbo Ouyang; Jing Luo
Journal:  J Diabetes Res       Date:  2022-02-26       Impact factor: 4.011

9.  DCNet: Densely Connected Deep Convolutional Encoder-Decoder Network for Nasopharyngeal Carcinoma Segmentation.

Authors:  Yang Li; Guanghui Han; Xiujian Liu
Journal:  Sensors (Basel)       Date:  2021-11-26       Impact factor: 3.576

10.  Trilateral Attention Network for Real-Time Cardiac Region Segmentation.

Authors:  Ghada Zamzmi; Sivaramakrishnan Rajaraman; Vandana Sachdev; Sameer Antani
Journal:  IEEE Access       Date:  2021-08-24       Impact factor: 3.367

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