Literature DB >> 33135672

Chitoporin from Serratia marcescens: recombinant expression, purification and crystallization.

Rawiporn Amornloetwattana1, Robert C Robinson1, Hannadige Sasimali Madusanka Soysa2, Bert van den Berg3, Wipa Suginta1.   

Abstract

Serratia marcescens is an opportunistic pathogen that commonly causes hospital-acquired infections and can utilize chitin-enriched nutrients as an alternative energy source. This study reports the identification of a chitoporin (ChiP), termed SmChiP, from the outer membrane of S. marcescens. Sequence alignment with genetically characterized ChiPs suggests that SmChiP is more closely related to the monomeric EcChiP from Escherichia coli than to the trimeric VhChiP from Vibrio campbellii. A single crystal of SmChiP grown under the condition 22%(w/v) PEG 8000, 0.1 M calcium acetate, 0.1 M MES pH 6.0 diffracted X-ray synchrotron radiation to 1.85 Å resolution. SmChiP co-crystallized with chitohexaose under the condition 19%(w/v) PEG 1500, 2 M ammonium phosphate monobasic, 0.1 M HEPES pH 7.0 diffracted X-rays to 2.70 Å resolution. Preliminary crystallographic analysis shows that both SmChiP crystal forms contain one molecule per asymmetric unit and that they belong to the tetragonal space groups P42212 and P41212, respectively. The SmChiP crystal has unit-cell parameters a = 82.97, b = 82.97, c = 189.53 Å, α = β = γ = 90°, while the crystal of SmChiP in complex with chitohexaose has unit-cell parameters a = 73.24, b = 73.24, c = 213.46 Å, α = β = γ = 90°. Initial assessment of the complex structure clearly revealed electron density for the sugar ligand. Structure determination of SmChiP in the absence and presence of chitohexaose should reveal the molecular basis of chitin utilization by S. marcescens.

Entities:  

Keywords:  Serratia marcescens; chitin; chitoligosaccharides; chitoporin; outer membrane proteins; sugar transport; sugar-specific porins

Mesh:

Substances:

Year:  2020        PMID: 33135672      PMCID: PMC7605108          DOI: 10.1107/S2053230X20013874

Source DB:  PubMed          Journal:  Acta Crystallogr F Struct Biol Commun        ISSN: 2053-230X            Impact factor:   1.056


  27 in total

1.  Breaking good resolutions with ARP/wARP.

Authors:  Richard J Morris; Petrus H Zwart; Serge Cohen; Francisco J Fernandez; Mattheos Kakaris; Olga Kirillova; Clemens Vonrhein; Anastassis Perrakis; Victor S Lamzin
Journal:  J Synchrotron Radiat       Date:  2003-11-28       Impact factor: 2.616

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Journal:  Methods Enzymol       Date:  1997       Impact factor: 1.600

3.  Chitosugar translocation by an unexpressed monomeric protein channel.

Authors:  H Sasimali M Soysa; Wipa Suginta; Watcharaporn Moonsap; M F Smith
Journal:  Phys Rev E       Date:  2018-05       Impact factor: 2.529

Review 4.  The chitinolytic machinery of Serratia marcescens--a model system for enzymatic degradation of recalcitrant polysaccharides.

Authors:  Gustav Vaaje-Kolstad; Svein J Horn; Morten Sørlie; Vincent G H Eijsink
Journal:  FEBS J       Date:  2013-03-07       Impact factor: 5.542

5.  Single-molecule trapping dynamics of sugar-uptake channels in marine bacteria.

Authors:  Wipa Suginta; M F Smith
Journal:  Phys Rev Lett       Date:  2013-06-04       Impact factor: 9.161

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Authors:  J Monreal; E T Reese
Journal:  Can J Microbiol       Date:  1969-07       Impact factor: 2.419

7.  Targeting of porin to the outer membrane of Escherichia coli. Rate of trimer assembly and identification of a dimer intermediate.

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Journal:  J Biol Chem       Date:  1988-06-05       Impact factor: 5.157

8.  Chitin catabolism in the marine bacterium Vibrio furnissii. Identification and molecular cloning of a chitoporin.

Authors:  N O Keyhani; X B Li; S Roseman
Journal:  J Biol Chem       Date:  2000-10-20       Impact factor: 5.157

9.  Identification and Functional Characterization of a Novel OprD-like Chitin Uptake Channel in Non-chitinolytic Bacteria.

Authors:  H Sasimali M Soysa; Wipa Suginta
Journal:  J Biol Chem       Date:  2016-05-12       Impact factor: 5.157

10.  Molecular uptake of chitooligosaccharides through chitoporin from the marine bacterium Vibrio harveyi.

Authors:  Wipa Suginta; Watcharin Chumjan; Kozhinjampara R Mahendran; Petra Janning; Albert Schulte; Mathias Winterhalter
Journal:  PLoS One       Date:  2013-01-29       Impact factor: 3.240

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  1 in total

1.  Single-channel characterization of the chitooligosaccharide transporter chitoporin (SmChiP) from the opportunistic pathogen Serratia marcescens.

Authors:  H Sasimali M Soysa; Sawitree Kumsaoad; Rawiporn Amornloetwattana; Takeshi Watanabe; Wipa Suginta
Journal:  J Biol Chem       Date:  2022-09-13       Impact factor: 5.486

  1 in total

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